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ACD52_99

Alias: ACD52_401016.11140.7

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_99_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2..772)
DNA (771bp) protein (257aa)
seg (db=Seg db_id=seg from=22 to=43)
seg (db=Seg db_id=seg from=82 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
seg 22..43 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_99_2

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comp(772..1818)
DNA (1047bp) protein (349aa)
seg (db=Seg db_id=seg from=266 to=289)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=322 to=344)
Purple acid phosphatase, N-terminal domain (db=superfamily db_id=SSF49363 from=19 to=130 evalue=3.8e-11 interpro_id=IPR008963 interpro_description=Purple acid phosphatase-like, N-terminal GO=Molecular Function: acid phosphatase activity (GO:0003993), Molecular Function: metal ion binding (GO:0046872))
ACD52_99_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1822..2127)
DNA (306bp) protein (102aa)
coiled-coil (db=Coil db_id=coil from=58 to=79 evalue=NA)
seg (db=Seg db_id=seg from=84 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil 58..79 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_99_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2124..2795)
DNA (672bp) protein (224aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=50)
seg (db=Seg db_id=seg from=67 to=78)
seg 67..78 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_99_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2796..3359)
DNA (564bp) protein (188aa)
seg (db=Seg db_id=seg from=169 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
PilN (db=HMMPfam db_id=PF05137 from=64 to=168 evalue=2.5e-06 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
seg 169..180 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_99_6

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comp(3414..3977)
DNA (564bp) protein (188aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
seg (db=Seg db_id=seg from=151 to=165)
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=99 to=175 evalue=2.8e-07 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD52_99_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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4342..5457
DNA (1116bp) protein (372aa)
putative peptidoglycan lipid II flippase MurJ
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=216)
transmembrane_regions (db=TMHMM db_id=tmhmm from=220 to=242)
ACD52_99_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

5543..6274
DNA (732bp) protein (244aa)
Heat-inducible transcription repressor hrcA
Heat-inducible transcription repressor hrcA n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NX46_9BACE (db=UNIREF evalue=2.0e-24 bit_score=115.0 identity=48.18 coverage=44.672131147541)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=88 evalue=1.5e-25 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=90 evalue=7.4e-22)
ACD52_99_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6271..6747
DNA (477bp) protein (159aa)
Protein GrpE
coiled-coil (db=Coil db_id=coil from=11 to=39 evalue=NA)
seg (db=Seg db_id=seg from=2 to=10)
GRPE (db=PatternScan db_id=PS01071 from=97 to=139 evalue=0.0 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
ACD52_99_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6910..7911
DNA (1002bp) protein (334aa)
dnaK; molecular chaperone DnaK
coiled-coil (db=Coil db_id=coil from=219 to=240 evalue=NA)
seg (db=Seg db_id=seg from=265 to=274)
HSP70_3 (db=PatternScan db_id=PS01036 from=297 to=311 evalue=0.0 interpro_id=IPR018181 interpro_description=Heat shock protein 70, conserved site)
ACD52_99_11

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7937..8407
DNA (471bp) protein (157aa)
Protein GrpE
coiled-coil (db=Coil db_id=coil from=10 to=45 evalue=NA)
seg (db=Seg db_id=seg from=103 to=119)
GRPE (db=PatternScan db_id=PS01071 from=96 to=138 evalue=0.0 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
ACD52_99_12

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8410..10335
DNA (1926bp) protein (642aa)
hypothetical protein
hypothetical protein
Chaperone protein dnaK n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=DNAK_THERP (db=UNIREF evalue=0.0 bit_score=697.0 identity=65.57 coverage=84.4236760124611)
coiled-coil (db=Coil db_id=coil from=252 to=273 evalue=NA)
ACD52_99_13

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10337..11173
DNA (837bp) protein (279aa)
molecular chaperone DnaJ
seg (db=Seg db_id=seg from=106 to=121)
seg (db=Seg db_id=seg from=71 to=96)
DNAJ_1 (db=PatternScan db_id=PS00636 from=50 to=69 evalue=0.0 interpro_id=IPR018253 interpro_description=Heat shock protein DnaJ, conserved site GO=Molecular Function: heat shock protein binding (GO:0031072))
Displaying 13 items

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