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ACD52_118

Alias: ACD52_197067.4542.7

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_118_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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2..481
DNA (480bp) protein (160aa)
DNA internalization-related competence protein ComEC/Rec2
ComE operon protein 3 n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BDP5_CLOBO (db=UNIREF evalue=1.0e-11 bit_score=71.6 identity=46.67 coverage=55.625)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=61)
seg (db=Seg db_id=seg from=118 to=132)
ACD52_118_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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509..1408
DNA (900bp) protein (300aa)
DNA internalization-related competence protein ComEC/Rec2
seg (db=Seg db_id=seg from=11 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=28 to=296 evalue=1.3e-36)
ACD52_118_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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1377..1871
DNA (495bp) protein (165aa)
1377..1871 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_118_4

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comp(1874..2833)
DNA (960bp) protein (320aa)
integrase catalytic subunit
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=180 to=319 evalue=2.8e-13 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=188 to=299 evalue=3.1e-13 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=208 to=297 evalue=0.00098)
ACD52_118_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2862..4235)
DNA (1374bp) protein (458aa)
prpC; phosphoprotein phosphatase (EC:3.1.3.16)
seg (db=Seg db_id=seg from=286 to=307)
seg (db=Seg db_id=seg from=352 to=364)
PP2C-like (db=superfamily db_id=SSF81606 from=48 to=288 evalue=6.2e-44 interpro_id=IPR001932 interpro_description=Protein phosphatase 2C-related GO=Molecular Function: catalytic activity (GO:0003824))
Displaying 5 items

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