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ACD52_119

Alias: ACD52_215066.10096.7

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_119_1

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comp(135..404)
DNA (270bp) protein (90aa)
135..404 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62724.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_119_2

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comp(517..1845)
DNA (1329bp) protein (443aa)
517..1845 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD62725.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD52_119_3

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1874..2071
DNA (198bp) protein (66aa)
1874..2071 + (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD62726.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_119_4

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comp(2088..2273)
DNA (186bp) protein (62aa)
seg (db=Seg db_id=seg from=38 to=55)
rpmG_bact: ribosomal protein L33 (db=HMMTigr db_id=TIGR01023 from=1 to=61 evalue=2.0e-15 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L33 (db=HMMPfam db_id=PF00471 from=7 to=57 evalue=3.1e-14 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=3 to=58 evalue=1.1e-12 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD52_119_5

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2446..3678
DNA (1233bp) protein (411aa)
group 1 glycosyl transferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=10 to=407 evalue=2.5e-26)
Glycos_transf_1 (db=HMMPfam db_id=PF00534 from=209 to=382 evalue=1.6e-13 interpro_id=IPR001296 interpro_description=Glycosyl transferase, group 1 GO=Biological Process: biosynthetic process (GO:0009058))
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=1 to=407 evalue=2.1e-07)
ACD52_119_6

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3953..4351
DNA (399bp) protein (133aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
Uncharacterized protein {ECO:0000313|EMBL:EKD62729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_119_7

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comp(4352..5413)
DNA (1062bp) protein (354aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GTP5_9FIRM (db=UNIREF evalue=4.0e-82 bit_score=308.0 identity=46.78 coverage=95.4802259887006)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
queA: S-adenosylmethionine:tRNA ribosyltrans (db=HMMTigr db_id=TIGR00113 from=2 to=353 evalue=2.6e-118 interpro_id=IPR003699 interpro_description=Queuosine biosynthesis protein GO=Biological Process: queuosine biosynthetic process (GO:0008616), Molecular Function: transferase activity (GO:0016740), Molecular Function: isomerase activity (GO:0016853))
QueA-like (db=superfamily db_id=SSF111337 from=3 to=353 evalue=4.4e-108 interpro_id=IPR003699 interpro_description=Queuosine biosynthesis protein GO=Biological Process: queuosine biosynthetic process (GO:0008616), Molecular Function: transferase activity (GO:0016740), Molecular Function: isomerase activity (GO:0016853))
ACD52_119_8

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5722..6942
DNA (1221bp) protein (407aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
Concanavalin A-like lectins/glucanases (db=superfamily db_id=SSF49899 from=89 to=306 evalue=1.6e-22 interpro_id=IPR008985 interpro_description=Concanavalin A-like lectin/glucanase)
Uncharacterized protein {ECO:0000313|EMBL:EKD62731.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_119_9

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comp(7152..7796)
DNA (645bp) protein (215aa)
peptidase M50
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZH8_9BACT (db=UNIREF evalue=1.0e-35 bit_score=153.0 identity=50.64 coverage=70.2325581395349)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
ACD52_119_10

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7882..8133
DNA (252bp) protein (84aa)
L28p-like (db=superfamily db_id=SSF143800 from=2 to=70 evalue=4.6e-11)
Ribosomal_L28 (db=HMMPfam db_id=PF00830 from=3 to=68 evalue=1.4e-09 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Uncharacterized protein {ECO:0000313|EMBL:EKD62733.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_119_11

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comp(8097..9080)
DNA (984bp) protein (328aa)
methionyl-tRNA formyltransferase
seg (db=Seg db_id=seg from=62 to=73)
GART (db=PatternScan db_id=PS00373 from=131 to=154 evalue=0.0 interpro_id=IPR001555 interpro_description=Phosphoribosylglycinamide formyltransferase, active site GO=Molecular Function: methyltransferase activity (GO:0008168))
Formyltransferase (db=superfamily db_id=SSF53328 from=1 to=205 evalue=3.0e-48 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD52_119_12

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comp(9077..9424)
DNA (348bp) protein (116aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase (db=superfamily db_id=SSF56420 from=1 to=112 evalue=3.9e-26 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Pep_deformylase (db=HMMPfam db_id=PF01327 from=2 to=99 evalue=8.5e-26 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
POLYPEPTIDE DEFORMYLASE (db=HMMPanther db_id=PTHR10458 from=1 to=112 evalue=9.6e-22 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD52_119_13

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9651..10130
DNA (480bp) protein (160aa)
rod shape-determining protein MreB
MreB_Mbl (db=HMMPfam db_id=PF06723 from=46 to=159 evalue=1.9e-42 interpro_id=IPR004753 interpro_description=Cell shape determining protein MreB/Mrl GO=Biological Process: cell morphogenesis (GO:0000902))
no description (db=Gene3D db_id=G3DSA:3.30.420.40 from=42 to=159 evalue=6.3e-34)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=42 to=159 evalue=1.1e-24)
Displaying 13 items

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