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ACD52_155

Alias: ACD52p_22150.12738.9

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_155_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1..627
DNA (627bp) protein (209aa)
hypothetical protein
Hypothetical membrane protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N0F8_ANATU (db=UNIREF evalue=2.0e-26 bit_score=122.0 identity=43.48 coverage=96.1722488038278)
seg (db=Seg db_id=seg from=24 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
ACD52_155_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

677..883
DNA (207bp) protein (69aa)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=3 to=67 evalue=2.2e-08 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
(db=HMMPfam db_id=PF00403 from=7 to=65 evalue=1.1e-07 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:3.30.70.100 from=5 to=67 evalue=7.4e-06)
HMA_2 (db=ProfileScan db_id=PS50846 from=5 to=68 evalue=13.912 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
ACD52_155_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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909..2594
DNA (1686bp) protein (562aa)
hypothetical protein cdiviTM7_02864 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2083 (db=UNIREF evalue=7.0e-32 bit_score=142.0 identity=23.71 coverage=93.2384341637011)
transmembrane_regions (db=TMHMM db_id=tmhmm from=332 to=351)
transmembrane_regions (db=TMHMM db_id=tmhmm from=366 to=388)
transmembrane_regions (db=TMHMM db_id=tmhmm from=429 to=451)
ACD52_155_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2600..3238)
DNA (639bp) protein (213aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=69 to=91)
seg 69..91 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_155_5

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comp(3239..4669)
DNA (1431bp) protein (477aa)
hypothetical protein
hypothetical protein
Cysteinyl-tRNA synthetase n=2 Tax=Dictyoglomus RepID=SYC_DICT6 (db=UNIREF evalue=5.0e-126 bit_score=455.0 identity=50.53 coverage=95.8071278825996)
cysS: cysteinyl-tRNA synthetase (db=HMMTigr db_id=TIGR00435 from=4 to=476 evalue=5.5e-130 interpro_id=IPR015803 interpro_description=Cysteinyl-tRNA synthetase, class Ia GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: cysteine-tRNA ligase activity (GO:0004817), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: cysteinyl-tRNA aminoacylation (GO:0006423))
ACD52_155_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4676..5161)
DNA (486bp) protein (162aa)
coiled-coil (db=Coil db_id=coil from=83 to=118 evalue=NA)
seg (db=Seg db_id=seg from=128 to=147)
seg (db=Seg db_id=seg from=91 to=108)
seg 91..108 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_155_7

Not on your lists

comp(5164..5769)
DNA (606bp) protein (202aa)
recR; recombination protein RecR
RECR (db=PatternScan db_id=PS01300 from=57 to=78 evalue=0.0 interpro_id=IPR015967 interpro_description=Recombination protein RecR, conserved site GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
recR: recombination protein RecR (db=HMMTigr db_id=TIGR00615 from=1 to=199 evalue=4.4e-87 interpro_id=IPR000093 interpro_description=DNA recombination protein RecR GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Recombination protein RecR (db=superfamily db_id=SSF111304 from=1 to=201 evalue=1.0e-71 interpro_id=IPR023627 interpro_description=Recombination protein RecR)
ACD52_155_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5828..6115)
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=73 to=94)
YbaB-like (db=superfamily db_id=SSF82607 from=8 to=86 evalue=1.9e-08 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
(db=HMMPfam db_id=PF02575 from=11 to=86 evalue=1.7e-07 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
no description (db=Gene3D db_id=G3DSA:3.30.1310.10 from=5 to=87 evalue=0.00039 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
ACD52_155_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6133..7617)
DNA (1485bp) protein (495aa)
hypothetical protein
seg (db=Seg db_id=seg from=462 to=471)
seg (db=Seg db_id=seg from=249 to=266)
dnaX_nterm: DNA polymerase III, subunit ga (db=HMMTigr db_id=TIGR02397 from=1 to=338 evalue=2.4e-100 interpro_id=IPR012763 interpro_description=DNA polymerase III, subunit gamma/ tau GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD52_155_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7689..8087)
DNA (399bp) protein (133aa)
seg (db=Seg db_id=seg from=116 to=131)
(db=HMMPfam db_id=PF02130 from=9 to=131 evalue=1.0e-12 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted GO=Molecular Function: metal ion binding (GO:0046872))
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=2 to=131 evalue=1.3e-11)
no description (db=Gene3D db_id=G3DSA:3.40.390.30 from=32 to=131 evalue=1.4e-06 interpro_id=IPR023091 interpro_description=Metalloprotease catalytic domain, predicted GO=Molecular Function: metalloendopeptidase activity (GO:0004222))
ACD52_155_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(8084..8512)
DNA (429bp) protein (143aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermovibrio ammonificans HB-1 RepID=E8T5M1_THEA1 (db=UNIREF evalue=6.0e-23 bit_score=110.0 identity=47.33 coverage=88.1118881118881)
(db=HMMPfam db_id=PF09424 from=4 to=141 evalue=9.4e-38 interpro_id=IPR019004 interpro_description=Uncharacterised domain YOR215C, mitochondrial)
GatB/YqeY motif (db=superfamily db_id=SSF89095 from=1 to=142 evalue=1.1e-28 interpro_id=IPR003789 interpro_description=Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
ACD52_155_12

Not on your lists

comp(8509..8994)
DNA (486bp) protein (162aa)
hypothetical protein
(db=HMMPfam db_id=PF01230 from=15 to=100 evalue=5.0e-08 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT-like (db=superfamily db_id=SSF54197 from=4 to=124 evalue=2.6e-23 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=5 to=107 evalue=2.3e-17 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
ACD52_155_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9015..9935
DNA (921bp) protein (307aa)
seg (db=Seg db_id=seg from=19 to=31)
seg (db=Seg db_id=seg from=36 to=42)
seg 19..31 Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_155_14

Not on your lists

comp(9956..10513)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD4_9BACT (db=UNIREF evalue=4.0e-36 bit_score=154.0 identity=44.09 coverage=98.3870967741936)
hypothetical protein
CofD-like (db=superfamily db_id=SSF142338 from=2 to=183 evalue=4.9e-30)
(db=HMMPfam db_id=PF01933 from=25 to=122 evalue=1.5e-25 interpro_id=IPR002882 interpro_description=LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052)
ACD52_155_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(10532..10945)
DNA (414bp) protein (138aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
seg (db=Seg db_id=seg from=6 to=18)
CofD-like (db=superfamily db_id=SSF142338 from=2 to=136 evalue=4.3e-37)
ACD52_155_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(10969..12192)
DNA (1224bp) protein (408aa)
Prolyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=328 to=349 evalue=NA)
seg (db=Seg db_id=seg from=249 to=260)
ACD52_155_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

12263..12772
DNA (510bp) protein (170aa)
seg (db=Seg db_id=seg from=49 to=59)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 17 items

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