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ACD52_27_13

Organism: ACD52

partial RP 30 / 55 MC: 15 BSCG 25 / 51 MC: 12 ASCG 0 / 38
Location: comp(7809..8309)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=7 to=137 evalue=3.3e-13) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.30e-13
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=4 to=27 evalue=1.7e-07 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-07

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Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 501
ATGTCTAAAAATAAAGGTTTTACATTAATGGAAATGTTGGTTGTAATTGGGGTTTTTGCGGCATTGGCGGCAATTGCTACTCAATCGATTTTACTTTCAGTAAAGGGGACTCGTAAAGCTGAGGCGACAGGTAAACTTAGGGGGAATTTAGAGTATGCTTTGGGAGTTATGGAGCGAAGGTTGCGGATGGCAACCGATGTTGGTTGCTTAGGTAATCCTGATCAAATTGATTTTTACGACGAAGCTGATAGCTGGGCCGTAGGCGCCGTCTACTACCTATGTGATATTGCAGGCTCTGATGATAATATTACAACGAACGCTTATTCAGGGGGTCTGCTCGACACGAATACTGTTGACTTAACGGCGTGCTCGTTTACTTGCGATGATCTTGCTGACCCCAGAACATTGACAATTTCGCTTAGTGCCAATGAGCAAAATGTCACTGGCGTGGAAAGCGCACAGGTTGACGTGTCTACAACAATAGTATTGCGTAATCGATAG
PROTEIN sequence
Length: 167
MSKNKGFTLMEMLVVIGVFAALAAIATQSILLSVKGTRKAEATGKLRGNLEYALGVMERRLRMATDVGCLGNPDQIDFYDEADSWAVGAVYYLCDIAGSDDNITTNAYSGGLLDTNTVDLTACSFTCDDLADPRTLTISLSANEQNVTGVESAQVDVSTTIVLRNR*