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ACD52_113_4

Organism: ACD52

partial RP 30 / 55 MC: 15 BSCG 25 / 51 MC: 12 ASCG 0 / 38
Location: 1529..2143

Top 3 Functional Annotations

Value Algorithm Source
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 205.0
  • Bit_score: 176
  • Evalue 7.50e-42
SIGMA70_1 (db=PatternScan db_id=PS00715 from=91 to=104 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=137 evalue=1.6e-40 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-40

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 615
ATGGTAAGGCAATATTTGAGTGAAATATTGCAAATACCATTATTGACAGATGAGCAGTCCGTTGCGATCGGTTTGAGAATAATTAGAGGCGAGGAATCTAAGTATGTTTTGGCACATGTTGACCCCGCACTCTGTGAATCAGAGGAATTAGCCCAGTTTATTGTTTGGCATGACGACCTTATATCGGCCCGAAAAGATTTGATTGCGCCGAATTCAAGATTGGTCATCGGTATTGCTAAAAAATATCTTGGGCGAGGTGTCGACTTTTTGGATTTGATACAAGAAGGCAACCTGGGATTAATGAAAGCTGCGGCGAAGTTTGACCCGGCACGAGGCTTTAGGTTTTCGACGTATGCGACTTGGTGGATAAGGCAATGTGTTAGTAGAGCAGTTATGCAACAAAGTAACACAATAAGGATCCCGGTTCATAGAGTAGAAAGCCTACGAAAGGCCGGTCAAAAGCTAGGTAATCTAGAGCAACAAATAGGCCGAAAGCCAAACGCTAGTGACATAAGCGATGAACTGGGTGCAAGTCAAGTTCATGTTAGAGAGTTTTTACTACAACTCACTGATACTGTGTCACTCGACGAGCCAATAGGTGATGATGTTGATTCC
PROTEIN sequence
Length: 205
MVRQYLSEILQIPLLTDEQSVAIGLRIIRGEESKYVLAHVDPALCESEELAQFIVWHDDLISARKDLIAPNSRLVIGIAKKYLGRGVDFLDLIQEGNLGLMKAAAKFDPARGFRFSTYATWWIRQCVSRAVMQQSNTIRIPVHRVESLRKAGQKLGNLEQQIGRKPNASDISDELGASQVHVREFLLQLTDTVSLDEPIGDDVDS