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ACD52_113

Alias: ACD52_429352.2110.7

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_113_1
R_OP11_Woesebacteria_40_22, Woesebacteria, Microgenomates, Bacteria

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2..265
DNA (264bp) protein (88aa)
seg (db=Seg db_id=seg from=32 to=45)
GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR23305 from=2 to=77 evalue=2.2e-11)
GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR23305:SF4 from=2 to=77 evalue=2.2e-11 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
GTP-binding protein YchF Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_40_22_curated
ACD52_113_2

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262..693
DNA (432bp) protein (144aa)
GTP-binding protein
GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR23305 from=13 to=143 evalue=1.9e-60)
GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR23305:SF4 from=13 to=143 evalue=1.9e-60 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
no description (db=Gene3D db_id=G3DSA:3.10.20.30 from=38 to=140 evalue=2.6e-35 interpro_id=IPR012675 interpro_description=Beta-grasp fold, ferredoxin-type)
ACD52_113_3

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735..1439
DNA (705bp) protein (235aa)
735..1439 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD62341.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_113_4

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1529..2143
DNA (615bp) protein (205aa)
putative RNA polymerase sigma factor
SIGMA70_1 (db=PatternScan db_id=PS00715 from=91 to=104 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=137 evalue=1.6e-40 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=14 to=136 evalue=4.8e-38)
Displaying 4 items

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