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ACD52_117_1

Organism: ACD52

partial RP 30 / 55 MC: 15 BSCG 25 / 51 MC: 12 ASCG 0 / 38
Location: 1..339

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigB similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 101.0
  • Bit_score: 71
  • Evalue 1.90e-10
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=31 to=102 evalue=9.1e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.10e-10
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=51 to=92 evalue=9.1e-09 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.10e-09

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 339
CTCGACGAGCCAATAGGAGATGATGTTGATTCCAATTCGGTAGGGGATTTTGTTGCAGATCCGAACTCTGGAATAGACGCCTTTGAAAGAAAGGTTATTCTGGATCTTGCGCGGCAAAGGTTGATGTCTGCAGGACCAGAATATACCGATCCCAGGGCAGTTGATGTATTGTTGTTGAGATCAGGTTTGTTTGATGGAAAGAGACATGCTTTACTGGAGATTGGAGAAAGGTATGGGCTGAGTAGAGAGAGGGTTAGACAAATACAAAACGAAGCGCGGCCGATTGCCAGGCGACTATTAAATGATCTGTATGAGGATTTACGACAAGATTACGATTGA
PROTEIN sequence
Length: 113
LDEPIGDDVDSNSVGDFVADPNSGIDAFERKVILDLARQRLMSAGPEYTDPRAVDVLLLRSGLFDGKRHALLEIGERYGLSRERVRQIQNEARPIARRLLNDLYEDLRQDYD*