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07M_4_2014_scaffold_6480

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_6480_1
R_OP11_Beckwithbacteria_47_23, Beckwithbacteria, Microgenomates, Bacteria

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2..808
DNA (807bp) protein (269aa)
rRNA (adenine-N(6)-)-methyltransferase (EC:2.1.1.181)
rRNA (Adenine-N(6)-)-methyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0G4_CLOA9
Tax=RIFCSPLOWO2_02_FULL_OP11_Beckwithbacteria_47_23_curated
07M_4_2014_scaffold_6480_2
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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915..1988
DNA (1074bp) protein (358aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA id=15190263 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
rod shape-determining protein
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_3
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

1978..2808
DNA (831bp) protein (277aa)
hypothetical protein; K07082 id=133621 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
aminodeoxychorismate lyase
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_4
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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2923..6093
DNA (3171bp) protein (1057aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=15190265 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_5
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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6100..7878
DNA (1779bp) protein (593aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=15190266 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA-directed RNA polymerase subunit beta'
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_6
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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7880..9454
DNA (1575bp) protein (525aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=15190266 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA-directed RNA polymerase subunit beta'
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_7
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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9508..9930
DNA (423bp) protein (141aa)
coiled-coil 13..34 id=133636 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_8
GWB1_OD1_45_9, Parcubacteria, Bacteria

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9927..10379
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKU14924.1}; TaxID=1618879 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
single-strand-binding protein
07M_4_2014_scaffold_6480_9
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

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10580..10936
DNA (357bp) protein (119aa)
ppm:PPSC2_c2172 RecA/RadA recombinase (multifunctional sos repair regulator); K03553 recombination protein RecA id=134010 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
recA; multifunctional SOS repair factor
Tax=GWA1_OD1_44_24_partial
07M_4_2014_scaffold_6480_10
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(11304..12158)
DNA (855bp) protein (285aa)
folD; methylenetetrahydrofolate dehydrogenase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=15189760 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_11
R_OD1_Wolfebacteria_38_11, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(12131..13393)
DNA (1263bp) protein (421aa)
glyA2; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2437407 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_38_11_curated
07M_4_2014_scaffold_6480_12
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

13473..14381
DNA (909bp) protein (303aa)
putative Tyrosine recombinase xerD id=15189932 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
Tyrosine recombinase XerD
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_13
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

14499..15044
DNA (546bp) protein (182aa)
id=3301969 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6480_trna_1
unknown

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comp(15315..15398)
DNA (84bp)
transferRNA Leu
Displaying 14 items

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