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07M_4_2014_scaffold_6519

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_6519_1
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(98..517)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003794552
50S ribosomal protein L15
Tax=GWA1_OD1_44_24_partial
07M_4_2014_scaffold_6519_2
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(602..1051)
DNA (450bp) protein (150aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=133711 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S5
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_3
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(1056..1421)
DNA (366bp) protein (122aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=15190537 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplR; 50S ribosomal protein L18
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_4
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(1424..1969)
DNA (546bp) protein (182aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=133716 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplF; LSU ribosomal protein L6p (L9e)
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_5
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(1984..2364)
DNA (381bp) protein (127aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=133712 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S8
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_6
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(2453..2962)
DNA (510bp) protein (170aa)
50S ribosomal protein L5 {ECO:0000313|EMBL:KKS25623.1}; TaxID=1619004 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=15190541 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L5
07M_4_2014_scaffold_6519_7
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(2965..3270)
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=1 Tax=uncultured bacterium RepID=K1X252_9BACT
LSU ribosomal protein L24P
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_8
GWC1_OD1_37_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(3267..3632)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 {ECO:0000313|EMBL:KKQ23325.1}; TaxID=1619010 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_37_10.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=15190543 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ribosomal protein L14
07M_4_2014_scaffold_6519_9
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(3637..3867)
DNA (231bp) protein (77aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=15190544 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S17
Tax=GWA1_OD1_44_24_partial
07M_4_2014_scaffold_6519_10
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(3864..4052)
DNA (189bp) protein (63aa)
coiled-coil 14..35 id=133700 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_11
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(4061..4474)
DNA (414bp) protein (138aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=15190546 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplP; 50S ribosomal protein L16
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_12
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(4468..5139)
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GSY0_9ZZZZ rbh
rpsC; ribosomal protein S3 (BS3)
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_13
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(5147..5668)
DNA (522bp) protein (174aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=133702 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L22
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_14
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(5876..6697)
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=1 Tax=uncultured bacterium RepID=K1XUF4_9BACT rbh
rplB; 50S ribosomal protein L2
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_15
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(6702..6953)
DNA (252bp) protein (84aa)
50S ribosomal protein L23 id=2824337 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplW; 50S ribosomal protein L23
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_16
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(6895..7338)
DNA (444bp) protein (148aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=15190552 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L4
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_17
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(7362..7949)
DNA (588bp) protein (196aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=133706 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplC; 50S ribosomal protein L3
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_18
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(8164..8475)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K1XF80_9BACT
30S ribosomal protein S10
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
07M_4_2014_scaffold_6519_19
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(8493..9692)
DNA (1200bp) protein (400aa)
translation elongation factor Tu; K02358 elongation factor Tu id=15189778 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
tuf2; elongation factor Tu
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_20

Not on your lists


comp(9853..11205)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D6E2A
Uncharacterized protein {ECO:0000313|EMBL:KKS95071.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
50S ribosomal protein L17
07M_4_2014_scaffold_6519_21

Not on your lists

comp(11208..15074)
DNA (3867bp) protein (1289aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037F0DCC rbh
Cell surface protein {ECO:0000313|EMBL:KKS95072.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
Fibronectin type III domain protein
07M_4_2014_scaffold_6519_22
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(15071..15772)
DNA (702bp) protein (234aa)
DNA-directed RNA polymerase subunit alpha id=15189780 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA-directed RNA polymerase subunit alpha
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_23
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(15773..16387)
DNA (615bp) protein (205aa)
30S ribosomal protein S4 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN9_9FIRM id=133287 bin=ACD81 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rpsD; 30S ribosomal protein S4
Tax=CG_Wolfe_01
07M_4_2014_scaffold_6519_24
RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(16410..16559)
DNA (150bp) protein (50aa)
Tax=RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated
07M_4_2014_scaffold_6519_25
GWC2_OD1_46_275, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(16888..17928)
DNA (1041bp) protein (347aa)
mreB2; MreB id=15190323 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:KKU36534.1}; TaxID=1619014 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC2_46_275.;"
mreB; Rod shape-determining protein MreB
07M_4_2014_scaffold_6519_26
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists


comp(18054..19286)
DNA (1233bp) protein (411aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) id=15190322 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Prolyl-tRNA synthetase
Tax=RIFOXYD1_FULL_OD1_48_21_curated
07M_4_2014_scaffold_6519_27
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(19307..20245)
DNA (939bp) protein (313aa)
membrane-associated zinc metalloprotease; K01417 [EC:3.4.24.-] id=133273 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
membrane-associated zinc metalloprotease
Tax=GWA1_OD1_44_24_partial
07M_4_2014_scaffold_6519_28
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(20221..20571)
DNA (351bp) protein (117aa)
ribosome recycling factor; K02838 ribosome recycling factor id=15190034 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ribosome recycling factor
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
07M_4_2014_scaffold_6519_29
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(20741..21241)
DNA (501bp) protein (167aa)
Tax=CG_Wolfe_01
Displaying 29 items

View Taxonomy