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ACD14_30

Alias: ACD14_128329.5348.9

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD14_30_1

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163..507
DNA (345bp) protein (115aa)
rplT; 50S ribosomal protein L20
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=114 evalue=1.7e-41 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_L20 (db=HMMPfam db_id=PF00453 from=3 to=108 evalue=1.8e-35 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD14_30_2

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comp(874..1590)
DNA (717bp) protein (239aa)
hypothetical protein
HAD-like (db=superfamily db_id=SSF56784 from=1 to=211 evalue=9.9e-19)
PHOSPHOSERINE PHOSPHATASE (db=HMMPanther db_id=PTHR10000 from=98 to=218 evalue=7.9e-13)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=98 to=211 evalue=1.3e-11)
ACD14_30_3

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comp(1591..2973)
DNA (1383bp) protein (461aa)
two-component sensor histidine kinase
seg (db=Seg db_id=seg from=18 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=18 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
ACD14_30_4

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comp(2957..4096)
DNA (1140bp) protein (380aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=346 to=368)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
seg (db=Seg db_id=seg from=128 to=149)
seg (db=Seg db_id=seg from=60 to=91)
ACD14_30_5

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comp(4185..5240)
DNA (1056bp) protein (352aa)
seg (db=Seg db_id=seg from=30 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=71 to=279 evalue=1.1e-22 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
Glyco_hydro_42 (db=HMMPfam db_id=PF02449 from=73 to=185 evalue=1.0e-05 interpro_id=IPR013529 interpro_description=Glycoside hydrolase, family 42, N-terminal GO=Molecular Function: beta-galactosidase activity (GO:0004565), Biological Process: carbohydrate metabolic process (GO:0005975), Cellular Component: beta-galactosidase complex (GO:0009341))
ACD14_30_6

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comp(5267..5380)
DNA (114bp) protein (38aa)
5267..5380 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE12121.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

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