ggKbase home page

ACD14_20

Alias: ACD14_28631.6546.9

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD14_20_1
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

56..736
DNA (681bp) protein (227aa)
Glucosamine-1-phosphate N-acetyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=224 evalue=9.7e-53)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=2 to=220 evalue=1.7e-46)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=9 to=222 evalue=1.6e-35)
ACD14_20_2
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

741..1769
DNA (1029bp) protein (343aa)
hypothetical protein
seg (db=Seg db_id=seg from=166 to=173)
CofD_related: conserved hypothetical pro (db=HMMTigr db_id=TIGR01826 from=6 to=330 evalue=7.1e-103 interpro_id=IPR010119 interpro_description=Uncharacterised protein family UPF0052)
CofD-like (db=superfamily db_id=SSF142338 from=2 to=327 evalue=1.1e-84)
ACD14_20_3
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

1803..3284
DNA (1482bp) protein (494aa)
manganese transport protein
manganese transport protein
UPI0001D5952A related cluster n=1 Tax=unknown RepID=UPI0001D5952A (db=UNIREF evalue=1.0e-90 bit_score=337.0 identity=45.67 coverage=83.1983805668016)
seg (db=Seg db_id=seg from=120 to=132)
ACD14_20_4
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3400..3927
DNA (528bp) protein (176aa)
seg (db=Seg db_id=seg from=134 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=75)
ACD14_20_5
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3993..4637
DNA (645bp) protein (215aa)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=209 evalue=5.6e-07)
Uncharacterized protein {ECO:0000313|EMBL:KKQ79803.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
ACD14_20_6
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

4640..5650
DNA (1011bp) protein (337aa)
D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=DDL_CALS8 (db=UNIREF evalue=6.0e-71 bit_score=271.0 identity=45.87 coverage=96.4391691394659)
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=279 to=306 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
DALA_DALA_LIGASE_1 (db=PatternScan db_id=PS00843 from=89 to=100 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD14_20_7
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

5660..6580
DNA (921bp) protein (307aa)
radical SAM enzyme, Cfr family
seg (db=Seg db_id=seg from=43 to=56)
Predicted radical SAM enzyme, Cfr type (db=HMMPIR db_id=PIRSF006004 from=1 to=307 evalue=5.6e-71 interpro_id=IPR004383 interpro_description=Ribosomal RNA large subunit methyltransferase RlmN; GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: RNA methyltransferase activity (GO:0008173))
Radical_SAM (db=HMMPfam db_id=PF04055 from=101 to=267 evalue=2.0e-08 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
Displaying 7 items

View Taxonomy