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ACD5_19

Alias: ACD5_82113.9665.9

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_19_1

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3..1802
DNA (1800bp) protein (600aa)
Conserved repeat domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ24_9GAMM (db=UNIREF evalue=5.0e-09 bit_score=67.0 identity=29.3 coverage=38.3333333333333)
seg (db=Seg db_id=seg from=25 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=44)
Uncharacterized protein {ECO:0000313|EMBL:EKE25033.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_19_2

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1927..3171
DNA (1245bp) protein (415aa)
Queuine tRNA-ribosyltransferase n=1 Tax=Tolumonas auensis DSM 9187 RepID=TGT_TOLAT (db=UNIREF evalue=3.0e-105 bit_score=385.0 identity=47.68 coverage=82.8915662650602)
tRNA-guanine transglycosylase (EC:2.4.2.29)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Q_tRNA_tgt: queuine tRNA-ribosyltransfera (db=HMMTigr db_id=TIGR00430 from=2 to=413 evalue=1.1e-167 interpro_id=IPR004803 interpro_description=Queuine tRNA-ribosyltransferase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
ACD5_19_3

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3367..3675
DNA (309bp) protein (103aa)
transcription regulator ArsR
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=10 to=102 evalue=3.1e-19)
no description (db=HMMSmart db_id=SM00418 from=20 to=98 evalue=1.7e-18 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=3 to=101 evalue=4.8e-17 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD5_19_4

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4484..6289
DNA (1806bp) protein (602aa)
Zn-dependent hydrolase
Zn-dependent hydrolase
RNA-metabolising metallo-beta-lactamase n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WPM1_9BACL (db=UNIREF evalue=9.0e-105 bit_score=384.0 identity=39.57 coverage=90.8637873754153)
seg (db=Seg db_id=seg from=485 to=500)
ACD5_19_5

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comp(6397..6777)
DNA (381bp) protein (127aa)
seg (db=Seg db_id=seg from=40 to=53)
seg (db=Seg db_id=seg from=56 to=68)
Uncharacterized protein {ECO:0000313|EMBL:EKE25037.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_19_6

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7570..8592
DNA (1023bp) protein (341aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
seg (db=Seg db_id=seg from=323 to=336)
coiled-coil (db=Coil db_id=coil from=75 to=110 evalue=NA)
TRYPTOPHANYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10055 from=1 to=338 evalue=1.5e-78 interpro_id=IPR002306 interpro_description=Tryptophanyl-tRNA synthetase, class Ib GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tryptophan-tRNA ligase activity (GO:0004830), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tryptophanyl-tRNA aminoacylation (GO:0006436))
ACD5_19_7

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8763..9146
DNA (384bp) protein (128aa)
DNA-binding response regulator
Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH26_9FIRM (db=UNIREF evalue=1.0e-17 bit_score=91.7 identity=42.02 coverage=90.625)
CheY-like (db=superfamily db_id=SSF52172 from=3 to=127 evalue=1.7e-30 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=4 to=126 evalue=2.5e-25)
ACD5_19_8

Not on your lists

9189..9701
DNA (513bp) protein (171aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
Uncharacterized protein {ECO:0000313|EMBL:EKE25032.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 8 items

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