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ACD5_39

Alias: ACD5_11919.17917.9

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_39_1

Not on your lists

3..95
DNA (93bp) protein (31aa)
3..95 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE25852.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_2

Not on your lists

130..1098
DNA (969bp) protein (323aa)
hypothetical protein
seg (db=Seg db_id=seg from=137 to=150)
Uncharacterized protein {ECO:0000313|EMBL:EKE25853.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD5_11919.17917.9G0002,ACD5_11919.17917.9_2,ACD5_C00039G00002 id=88426 tax=ACD5 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
ACD5_39_3

Not on your lists

1181..1732
DNA (552bp) protein (184aa)
coiled-coil (db=Coil db_id=coil from=10 to=31 evalue=NA)
coiled-coil (db=Coil db_id=coil from=38 to=59 evalue=NA)
coiled-coil (db=Coil db_id=coil from=83 to=107 evalue=NA)
seg (db=Seg db_id=seg from=11 to=32)
ACD5_39_4

Not on your lists

1813..2532
DNA (720bp) protein (240aa)
1813..2532 + (rbs_motif=TAAAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE25855.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_5

Not on your lists

2554..3063
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Vibrio phage KVP40 RepID=Q6WHF1_BPKV4 (db=UNIREF evalue=2.0e-20 bit_score=101.0 identity=38.46 coverage=98.2352941176471)
seg (db=Seg db_id=seg from=148 to=159)
Uncharacterized protein {ECO:0000313|EMBL:EKE25856.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD5_39_6

Not on your lists

3065..3574
DNA (510bp) protein (170aa)
seg (db=Seg db_id=seg from=116 to=127)
Uncharacterized protein {ECO:0000313|EMBL:EKE25857.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_7

Not on your lists

3579..4883
DNA (1305bp) protein (435aa)
TNF-like (db=superfamily db_id=SSF49842 from=297 to=434 evalue=4.6e-10 interpro_id=IPR008983 interpro_description=Tumour necrosis factor-like)
Uncharacterized protein {ECO:0000313|EMBL:EKE25858.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_8

Not on your lists

4895..5353
DNA (459bp) protein (153aa)
hypothetical protein
TNF-like (db=superfamily db_id=SSF49842 from=13 to=152 evalue=9.1e-08 interpro_id=IPR008983 interpro_description=Tumour necrosis factor-like)
C1q (db=HMMPfam db_id=PF00386 from=24 to=129 evalue=1.0e-05 interpro_id=IPR001073 interpro_description=Complement C1q protein)
hypothetical protein alias=ACD5_11919.17917.9_8,ACD5_11919.17917.9G0008,ACD5_C00039G00008 id=88430 tax=ACD5 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OD1-i organism_desc=OD1-i
ACD5_39_9

Not on your lists

5358..5798
DNA (441bp) protein (147aa)
5358..5798 + (rbs_motif=TATAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE25860.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_10

Not on your lists

5832..6122
DNA (291bp) protein (97aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKE25861.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_11

Not on your lists

6124..7599
DNA (1476bp) protein (492aa)
6124..7599 + (rbs_motif=AAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE25862.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_12

Not on your lists

7607..8302
DNA (696bp) protein (232aa)
DNA-binding domain of intron-encoded endonucleases (db=superfamily db_id=SSF64496 from=37 to=79 evalue=5.5e-07)
NUMOD3 (db=HMMPfam db_id=PF07460 from=36 to=48 evalue=0.0073 interpro_id=IPR003611 interpro_description=Intron-encoded nuclease 2 GO=Molecular Function: endonuclease activity (GO:0004519))
no description (db=HMMSmart db_id=SM00496 from=35 to=51 evalue=0.23 interpro_id=IPR003611 interpro_description=Intron-encoded nuclease 2 GO=Molecular Function: endonuclease activity (GO:0004519))
NUMOD3 (db=HMMPfam db_id=PF07460 from=61 to=74 evalue=0.26 interpro_id=IPR003611 interpro_description=Intron-encoded nuclease 2 GO=Molecular Function: endonuclease activity (GO:0004519))
ACD5_39_13

Not on your lists

8397..9767
DNA (1371bp) protein (457aa)
seg (db=Seg db_id=seg from=230 to=245)
seg (db=Seg db_id=seg from=168 to=179)
Uncharacterized protein {ECO:0000313|EMBL:EKE25864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_14

Not on your lists

9772..9978
DNA (207bp) protein (69aa)
coiled-coil (db=Coil db_id=coil from=19 to=65 evalue=NA)
seg (db=Seg db_id=seg from=52 to=63)
Uncharacterized protein {ECO:0000313|EMBL:EKE25865.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_15

Not on your lists

9992..10204
DNA (213bp) protein (71aa)
coiled-coil (db=Coil db_id=coil from=7 to=28 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE25866.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_39_16

Not on your lists

10210..11442
DNA (1233bp) protein (411aa)
coiled-coil (db=Coil db_id=coil from=119 to=140 evalue=NA)
coiled-coil (db=Coil db_id=coil from=165 to=186 evalue=NA)
coiled-coil (db=Coil db_id=coil from=233 to=254 evalue=NA)
seg (db=Seg db_id=seg from=35 to=48)
ACD5_39_17

Not on your lists

11463..17903
DNA (6441bp) protein (2147aa)
seg (db=Seg db_id=seg from=1924 to=1944)
seg (db=Seg db_id=seg from=715 to=736)
seg (db=Seg db_id=seg from=644 to=654)
seg (db=Seg db_id=seg from=577 to=592)
Displaying 17 items

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