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ACD5_40

Alias: ACD5_204913.3795.6

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_40_1

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comp(97..753)
DNA (657bp) protein (219aa)
ctc; 50S ribosomal protein L25
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=3 to=192 evalue=1.7e-50 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=7 to=183 evalue=8.2e-33 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal_L25p (db=HMMPfam db_id=PF01386 from=7 to=92 evalue=1.1e-22 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
ACD5_40_2

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1598..2341
DNA (744bp) protein (248aa)
hypothetical protein
Integrase core domain protein (Fragment) n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FLY7_9AQUI (db=UNIREF evalue=4.0e-21 bit_score=104.0 identity=36.6 coverage=58.4677419354839)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=85 to=247 evalue=3.7e-30 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=89 to=200 evalue=3.7e-22 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
ACD5_40_3
GWD2_OD1_38_11, Parcubacteria, Bacteria

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comp(3151..3828)
DNA (678bp) protein (226aa)
rod shape-determining protein RodA
seg (db=Seg db_id=seg from=22 to=42)
seg (db=Seg db_id=seg from=81 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
Displaying 3 items

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