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ACD5_43

Alias: ACD5_96580.5470.9

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_43_1

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comp(2..205)
DNA (204bp) protein (68aa)
hydrogenase assembly chaperone HypC/HupF
HupF_HypC (db=HMMPfam db_id=PF01455 from=1 to=63 evalue=3.1e-23 interpro_id=IPR001109 interpro_description=Hydrogenase expression/formation protein, HupF/HypC)
hypC_hupF: hydrogenase assembly chaperone H (db=HMMTigr db_id=TIGR00074 from=1 to=59 evalue=4.9e-20 interpro_id=IPR001109 interpro_description=Hydrogenase expression/formation protein, HupF/HypC)
HUPFHYPC (db=FPrintScan db_id=PR00445 from=2 to=9 evalue=6.6e-11 interpro_id=IPR001109 interpro_description=Hydrogenase expression/formation protein, HupF/HypC)
ACD5_43_2

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comp(326..1252)
DNA (927bp) protein (309aa)
fba; fructose-bisphosphate aldolase Fba (EC:4.1.2.13)
ALDOLASE_CLASS_II_1 (db=PatternScan db_id=PS00602 from=72 to=85 evalue=0.0 interpro_id=IPR000771 interpro_description=Ketose-bisphosphate aldolase, class-II GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096), Molecular Function: zinc ion binding (GO:0008270))
Fructose-bisphosphate aldolase II (db=HMMPIR db_id=PIRSF001359 from=1 to=287 evalue=9.1e-98 interpro_id=IPR000771 interpro_description=Ketose-bisphosphate aldolase, class-II GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096), Molecular Function: zinc ion binding (GO:0008270))
F_bP_aldolase (db=HMMPfam db_id=PF01116 from=2 to=286 evalue=4.6e-92 interpro_id=IPR000771 interpro_description=Ketose-bisphosphate aldolase, class-II GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096), Molecular Function: zinc ion binding (GO:0008270))
ACD5_43_3

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comp(1399..2175)
DNA (777bp) protein (259aa)
tpiA; triose-phosphate isomerase (EC:5.3.1.1)
seg (db=Seg db_id=seg from=111 to=123)
seg (db=Seg db_id=seg from=184 to=199)
seg (db=Seg db_id=seg from=53 to=64)
ACD5_43_4

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comp(2180..2659)
DNA (480bp) protein (160aa)
putative small multi-drug export protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=66)
ACD5_43_5

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comp(2768..3853)
DNA (1086bp) protein (362aa)
Galactose-1-phosphate uridylyltransferase
seg (db=Seg db_id=seg from=2 to=17)
Galactose-1-phosphate uridylyltransferase (db=HMMPIR db_id=PIRSF000808 from=7 to=361 evalue=4.2e-73 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR11943 from=34 to=361 evalue=8.3e-53 interpro_id=IPR001937 interpro_description=Galactose-1-phosphate uridyl transferase, class I GO=Biological Process: galactose metabolic process (GO:0006012), Molecular Function: UDP-glucose:hexose-1-phosphate uridylyltransferase activity (GO:0008108), Molecular Function: zinc ion binding (GO:0008270))
ACD5_43_6

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comp(3889..4635)
DNA (747bp) protein (249aa)
glycosyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=219 evalue=1.5e-40)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=13 to=245 evalue=3.7e-40)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=8 to=170 evalue=4.4e-28 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD5_43_7

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comp(4962..5390)
DNA (429bp) protein (143aa)
endonuclease
Putative Holliday junction resolvase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0Z6_9DELT (db=UNIREF evalue=3.0e-10 bit_score=67.4 identity=27.41 coverage=89.5104895104895)
UPF0081 (db=HMMPfam db_id=PF03652 from=15 to=140 evalue=2.1e-26 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=12 to=140 evalue=3.4e-20 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD5_43_8

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5410..5508
DNA (99bp) protein (33aa)
5410..5508 + (rbs_motif=TAGAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE24989.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 8 items

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