Alias: ACD5_61184.5706.9
name | lists | location/seqs | annotations | notes |
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ACD5_99_1
uncultured bacterium, Bacteria
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Not on your lists |
299..490
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transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=9 to=37 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=5 to=59 evalue=7.5e-21 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secE_bact: preprotein translocase, SecE sub (db=HMMTigr db_id=TIGR00964 from=6 to=63 evalue=6.7e-20 interpro_id=IPR005807 interpro_description=SecE subunit of protein translocation complex GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
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ACD5_99_2
uncultured bacterium, Bacteria
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Not on your lists |
565..1110
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nusG; transcription antitermination factor
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=3.8e-78 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=9 to=117 evalue=1.3e-42 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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ACD5_99_3
uncultured bacterium, Bacteria
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Not on your lists |
1204..1674
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rplK; 50S ribosomal protein L11
seg (db=Seg db_id=seg from=88 to=109)
seg (db=Seg db_id=seg from=34 to=48)
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=156 evalue=1.5e-74 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD5_99_4
uncultured bacterium, Bacteria
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Not on your lists |
2062..2655
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rplA; 50S ribosomal protein L1
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=92 to=110 evalue=0.0 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=2 to=197 evalue=3.0e-90 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=196 evalue=1.1e-74 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
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ACD5_99_5
uncultured bacterium, Bacteria
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Not on your lists |
2768..3595
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKE25093.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD5_99_6
uncultured bacterium, Bacteria
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Not on your lists |
3778..4332
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Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN2_9EURY (db=UNIREF evalue=2.0e-08 bit_score=62.0 identity=25.0 coverage=94.0540540540541)
seg (db=Seg db_id=seg from=116 to=129)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=184 evalue=8.2e-17)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=183 evalue=5.2e-06)
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ACD5_99_7
uncultured bacterium, Bacteria
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Not on your lists |
4363..5343
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thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase/dCMP hydroxymethylase (db=superfamily db_id=SSF55831 from=16 to=326 evalue=4.0e-55 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
Thymidylat_synt (db=HMMPfam db_id=PF00303 from=25 to=322 evalue=2.1e-48 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
no description (db=Gene3D db_id=G3DSA:3.30.572.10 from=22 to=326 evalue=4.1e-45 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
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ACD5_99_8
uncultured bacterium, Bacteria
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Not on your lists |
5509..5742
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HIT-like (db=superfamily db_id=SSF54197 from=3 to=70 evalue=1.3e-08 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
DcpS_C (db=HMMPfam db_id=PF11969 from=3 to=70 evalue=2.9e-05)
Uncharacterized protein {ECO:0000313|EMBL:EKE25091.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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