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ACD5_128

Alias: ACD5_22197.2543.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_128_1

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comp(31..204)
DNA (174bp) protein (58aa)
rpmB; ribosomal protein L28
L28: ribosomal protein L28 (db=HMMTigr db_id=TIGR00009 from=1 to=52 evalue=1.2e-18 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L28 (db=HMMPfam db_id=PF00830 from=3 to=56 evalue=1.1e-14 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=1 to=57 evalue=1.5e-14)
ACD5_128_2

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361..1059
DNA (699bp) protein (233aa)
transmembrane protein
M50 family peptidase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7H9_9ACTN (db=UNIREF evalue=1.0e-30 bit_score=136.0 identity=46.59 coverage=69.0987124463519)
seg (db=Seg db_id=seg from=105 to=120)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
ACD5_128_3

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1291..1713
DNA (423bp) protein (141aa)
30S ribosomal protein S12
seg (db=Seg db_id=seg from=9 to=21)
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=137 evalue=5.8e-83 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD5_128_4

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1790..2257
DNA (468bp) protein (156aa)
30S ribosomal protein S7
RIBOSOMAL_S7 (db=PatternScan db_id=PS00052 from=20 to=46 evalue=0.0 interpro_id=IPR020606 interpro_description=Ribosomal protein S7, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412))
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=3 to=154 evalue=1.6e-75 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal_S7 (db=HMMPfam db_id=PF00177 from=1 to=149 evalue=3.2e-57 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD5_128_5

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2346..2576
DNA (231bp) protein (77aa)
translation elongation factor G
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=52 to=67 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
TRANSLATION FACTOR (db=HMMPanther db_id=PTHR23115 from=8 to=76 evalue=7.9e-36)
TRANSLATION ELONGATION FACTOR G (db=HMMPanther db_id=PTHR23115:SF13 from=8 to=76 evalue=7.9e-36)
Displaying 5 items

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