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ACD5_148

Alias: ACD5_7884.4885.8

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_148_1
GWC1_OD1_38_22, Parcubacteria, Bacteria

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comp(2..172)
DNA (171bp) protein (57aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=3 to=57 evalue=4.0e-10 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=3 to=57 evalue=5.6e-08 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] alias=ACD5_7884.4885.8G0001,ACD5_7884.4885.8_1,ACD5_C00148G00001 id=89102 tax=ACD5 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
ACD5_148_2
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

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comp(222..869)
DNA (648bp) protein (216aa)
adenylate kinase
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=212 evalue=9.7e-57)
ADENYLATE KINASE (db=HMMPanther db_id=PTHR23359:SF22 from=1 to=214 evalue=8.5e-51)
NUCLEOTIDE KINASE (db=HMMPanther db_id=PTHR23359 from=1 to=214 evalue=8.5e-51 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
ACD5_148_3
GWC1_OD1_38_22, Parcubacteria, Bacteria

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comp(1006..2277)
DNA (1272bp) protein (424aa)
preprotein translocase subunit SecY
preprotein translocase subunit SecY
Preprotein translocase subunit secY n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2M5_SPHTD (db=UNIREF evalue=5.0e-112 bit_score=408.0 identity=53.36 coverage=99.5283018867924)
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=226)
ACD5_148_4
GWC1_OD1_38_22, Parcubacteria, Bacteria

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comp(2380..2817)
DNA (438bp) protein (146aa)
rplO; 50S ribosomal protein L15
seg (db=Seg db_id=seg from=7 to=25)
Ribosomal proteins L15p and L18e (db=superfamily db_id=SSF52080 from=4 to=144 evalue=9.0e-20 interpro_id=IPR021131 interpro_description=Ribosomal protein L18e/L15)
rplO_bact: ribosomal protein L15 (db=HMMTigr db_id=TIGR01071 from=2 to=144 evalue=2.0e-18 interpro_id=IPR005749 interpro_description=Ribosomal protein L15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD5_148_5
GWC1_OD1_38_22, Parcubacteria, Bacteria

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comp(2919..3449)
DNA (531bp) protein (177aa)
rpsE; 30S ribosomal protein S5
seg (db=Seg db_id=seg from=108 to=121)
seg (db=Seg db_id=seg from=44 to=64)
seg (db=Seg db_id=seg from=26 to=40)
ACD5_148_6
GWC1_OD1_38_22, Parcubacteria, Bacteria

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comp(3545..3895)
DNA (351bp) protein (117aa)
ribosomal protein L18 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3775F (db=UNIREF evalue=2.0e-28 bit_score=128.0 identity=55.93 coverage=98.2905982905983)
50S ribosomal protein L18
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=6 to=116 evalue=1.8e-47 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translational machinery components (db=superfamily db_id=SSF53137 from=23 to=116 evalue=1.2e-31)
ACD5_148_7
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(3966..4502)
DNA (537bp) protein (179aa)
50S ribosomal protein L6
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=175 evalue=2.4e-80 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
60S/50S RIBOSOMAL PROTEIN L6/L9 (db=HMMPanther db_id=PTHR11655 from=2 to=178 evalue=7.8e-65 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
50S RIBOSOMAL PROTEIN L6 (db=HMMPanther db_id=PTHR11655:SF6 from=2 to=178 evalue=7.8e-65)
ACD5_148_8
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4601..4918)
DNA (318bp) protein (106aa)
rpsH; 30S ribosomal protein S8
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=1 to=105 evalue=1.4e-32 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=1 to=105 evalue=8.2e-26 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S8 (db=HMMPanther db_id=PTHR11758 from=1 to=105 evalue=7.5e-24 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 8 items

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