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ACD5_183

Alias: ACD5p_32034.14637.9

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_183_1

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comp(48..443)
DNA (396bp) protein (132aa)
hypothetical protein
Uncharacterised conserved protein, UCP021774 type (db=HMMPIR db_id=PIRSF021774 from=1 to=131 evalue=2.5e-55 interpro_id=IPR016796 interpro_description=Uncharacterised conserved protein UCP021774)
no description (db=Gene3D db_id=G3DSA:3.30.310.70 from=6 to=131 evalue=5.2e-36 interpro_id=IPR005180 interpro_description=Domain of unknown function DUF302)
TT1751-like (db=superfamily db_id=SSF103247 from=8 to=131 evalue=5.4e-34 interpro_id=IPR005180 interpro_description=Domain of unknown function DUF302)
ACD5_183_2

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comp(523..759)
DNA (237bp) protein (79aa)
seg (db=Seg db_id=seg from=1 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=35 to=50)
(db=HMMPfam db_id=PF09851 from=2 to=78 evalue=6.9e-20 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
ACD5_183_3
GWD2_OD1_38_11, Parcubacteria, Bacteria

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comp(848..3220)
DNA (2373bp) protein (791aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=532 to=549)
seg (db=Seg db_id=seg from=411 to=424)
seg (db=Seg db_id=seg from=18 to=32)
ACD5_183_4

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comp(4626..4895)
DNA (270bp) protein (90aa)
coiled-coil (db=Coil db_id=coil from=51 to=62 evalue=NA)
seg (db=Seg db_id=seg from=59 to=77)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=61 evalue=8.3e-08 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
(db=HMMPfam db_id=PF00403 from=6 to=58 evalue=1.4e-06 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
ACD5_183_5

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comp(4916..5191)
DNA (276bp) protein (92aa)
hypothetical protein
(db=HMMPfam db_id=PF02583 from=10 to=85 evalue=1.0e-16 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
hypothetical protein alias=ACD5p_32034.14637.9_5,ACD5p_32034.14637.9G0005,ACD5_C00183G00005 id=89343 tax=ACD5 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE24935.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_183_6

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comp(5436..7238)
DNA (1803bp) protein (601aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=197 to=219)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=274)
seg (db=Seg db_id=seg from=471 to=492)
ACD5_183_7

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comp(7486..7887)
DNA (402bp) protein (134aa)
seg (db=Seg db_id=seg from=8 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKE24937.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_183_8

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comp(7975..9324)
DNA (1350bp) protein (450aa)
Excinuclease ABC subunit C
seg (db=Seg db_id=seg from=226 to=243)
seg (db=Seg db_id=seg from=120 to=145)
(db=HMMPfam db_id=PF08459 from=289 to=436 evalue=7.9e-40 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
ACD5_183_9

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9412..9774
DNA (363bp) protein (121aa)
9412..9774 + ( gc_cont=0.386)
Uncharacterized protein {ECO:0000313|EMBL:EKE24939.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_183_10

Not on your lists

9768..10184
DNA (417bp) protein (139aa)
9768..10184 + ( gc_cont=0.410)
Uncharacterized protein {ECO:0000313|EMBL:EKE24940.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_183_11

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comp(10253..13063)
DNA (2811bp) protein (937aa)
uvrA1; excinuclease ABC subunit A
uvrA1; excinuclease ABC subunit A
seg (db=Seg db_id=seg from=178 to=187)
ACD5_183_12

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comp(13995..14675)
DNA (681bp) protein (227aa)
seg (db=Seg db_id=seg from=205 to=214)
seg (db=Seg db_id=seg from=92 to=103)
Fibronectin type III (db=superfamily db_id=SSF49265 from=109 to=204 evalue=0.00039 interpro_id=IPR008957 interpro_description=Fibronectin type III domain)
no description (db=HMMSmart db_id=SM00060 from=14 to=93 evalue=2.5 interpro_id=IPR003961 interpro_description=Fibronectin, type III GO=Molecular Function: protein binding (GO:0005515))
Displaying 12 items

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