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ACD61_1

Alias: ACD61_101773.20074.14

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_1_1

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comp(3..593)
DNA (591bp) protein (197aa)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=12 to=122 evalue=1.7e-16)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=20 to=44 evalue=0.00061)
uvrA; excinuclease ABC, A subunit; K03701 excinuclease ABC subunit A alias=ACD61_C00001G00001,ACD61_101773.20074.14G0001,ACD61_101773.20074.14_1 id=91353 tax=ACD61 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
ACD61_1_2

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701..1612
DNA (912bp) protein (304aa)
glycosyltransferase
Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWW6_9PLAN (db=UNIREF evalue=2.0e-17 bit_score=93.2 identity=26.83 coverage=75.9868421052632)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=31 to=303 evalue=2.0e-38)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=35 to=139 evalue=1.6e-26 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD61_1_3

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1625..2242
DNA (618bp) protein (206aa)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=109 to=130 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=81 to=193 evalue=2.2e-20 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=81 to=184 evalue=6.0e-17 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=81 to=185 evalue=4.1e-15 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD61_1_4

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comp(2239..2673)
DNA (435bp) protein (145aa)
2239..2673 - (rbs_motif=ATAAT rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD53594.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_1_5

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2687..3667
DNA (981bp) protein (327aa)
hypothetical protein (db=KEGG evalue=3.0e-14 bit_score=82.8 identity=26.98 coverage=79.8165137614679)
seg (db=Seg db_id=seg from=148 to=161)
DUF362 (db=HMMPfam db_id=PF04015 from=31 to=272 evalue=1.0e-19 interpro_id=IPR007160 interpro_description=Protein of unknown function DUF362)
hypothetical protein alias=ACD61_C00001G00005,ACD61_101773.20074.14G0005,ACD61_101773.20074.14_5 id=91356 tax=ACD61 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria organism_group=OP11 organism_desc=OP11
ACD61_1_6

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comp(3634..4227)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTB8_9BACT (db=UNIREF evalue=1.0e-09 bit_score=66.2 identity=29.69 coverage=92.9292929292929)
seg (db=Seg db_id=seg from=66 to=81)
Uncharacterized protein {ECO:0000313|EMBL:EKD53596.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_1_7

Not on your lists

4320..4979
DNA (660bp) protein (220aa)
hypothetical protein; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9] (db=KEGG evalue=1.0e-12 bit_score=76.3 identity=35.46 coverage=60.4545454545455)
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=15 to=216 evalue=5.6e-20)
no description (db=Gene3D db_id=G3DSA:3.40.50.1580 from=3 to=218 evalue=1.4e-18)
PNP_UDP_1 (db=HMMPfam db_id=PF01048 from=15 to=195 evalue=4.4e-16 interpro_id=IPR000845 interpro_description=Nucleoside phosphorylase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: nucleoside metabolic process (GO:0009116))
ACD61_1_8

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4976..5884
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase (RfbD-2) n=1 Tax=Fusobacterium sp. 1_1_41FAA RepID=D6LDB9_9FUSO (db=UNIREF evalue=5.0e-40 bit_score=168.0 identity=35.42 coverage=92.7392739273927)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=301 evalue=3.8e-55)
RmlD_sub_bind (db=HMMPfam db_id=PF04321 from=3 to=280 evalue=4.9e-48 interpro_id=IPR005913 interpro_description=dTDP-4-dehydrorhamnose reductase GO=Molecular Function: dTDP-4-dehydrorhamnose reductase activity (GO:0008831), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
ACD61_1_9

Not on your lists

5892..6764
DNA (873bp) protein (291aa)
shikimate 5-dehydrogenase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=105 to=285 evalue=5.3e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=103 to=286 evalue=4.1e-24 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
Aminoacid dehydrogenase-like, N-terminal domain (db=superfamily db_id=SSF53223 from=1 to=104 evalue=1.9e-12)
ACD61_1_10

Not on your lists

6745..7461
DNA (717bp) protein (239aa)
seg (db=Seg db_id=seg from=20 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD53600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_1_11

Not on your lists

7458..8492
DNA (1035bp) protein (345aa)
7458..8492 + (rbs_motif=AAT rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD53601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_1_12

Not on your lists

8489..9730
DNA (1242bp) protein (414aa)
Radical SAM domain protein n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978A50 (db=UNIREF evalue=2.0e-09 bit_score=67.0 identity=27.01 coverage=45.4106280193237)
seg (db=Seg db_id=seg from=310 to=320)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=58 to=251 evalue=1.5e-12)
Radical_SAM (db=HMMPfam db_id=PF04055 from=62 to=201 evalue=2.9e-07 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD61_1_13

Not on your lists

9693..11153
DNA (1461bp) protein (487aa)
radical SAM family protein n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B538A2 (db=UNIREF evalue=9.0e-42 bit_score=175.0 identity=28.6 coverage=84.1889117043121)
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=197 to=441 evalue=1.3e-30)
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=133 to=430 evalue=3.5e-26 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
ACD61_1_14

Not on your lists

11221..12663
DNA (1443bp) protein (481aa)
molecular chaperone-like protein
HSP70_2 (db=PatternScan db_id=PS00329 from=251 to=264 evalue=0.0 interpro_id=IPR018181 interpro_description=Heat shock protein 70, conserved site)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=245 to=477 evalue=4.4e-30)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=2 to=244 evalue=4.8e-19)
ACD61_1_15

Not on your lists

comp(12675..13628)
DNA (954bp) protein (318aa)
ABC transporter
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=3 to=259 evalue=6.2e-86)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF16 from=3 to=259 evalue=6.2e-86)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=252 evalue=5.4e-55)
ACD61_1_16

Not on your lists

comp(13631..14458)
DNA (828bp) protein (276aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=241 to=258)
transmembrane_regions (db=TMHMM db_id=tmhmm from=214 to=236)
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175)
ACD61_1_17

Not on your lists

comp(14439..15218)
DNA (780bp) protein (260aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus cereus Rock3-28 RepID=C2V5L7_BACCE (db=UNIREF evalue=1.0e-10 bit_score=70.1 identity=25.42 coverage=88.0769230769231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=209)
ACD61_1_18

Not on your lists

15327..15893
DNA (567bp) protein (189aa)
hypothetical protein (db=KEGG evalue=3.0e-09 bit_score=65.1 identity=27.55 coverage=98.9417989417989)
hypothetical protein alias=ACD61_C00001G00018,ACD61_101773.20074.14G0018,ACD61_101773.20074.14_18 id=91360 tax=ACD61 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD53608.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_1_19

Not on your lists

15880..16272
DNA (393bp) protein (131aa)
DNA mismatch repair protein MutT
Nudix (db=superfamily db_id=SSF55811 from=2 to=130 evalue=5.6e-21 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=6 to=118 evalue=8.8e-17 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=7 to=118 evalue=2.8e-16 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD61_1_20

Not on your lists

comp(16361..16897)
DNA (537bp) protein (179aa)
hypothetical protein (db=KEGG evalue=5.0e-12 bit_score=73.6 identity=35.62 coverage=73.1843575418994)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=63 to=84 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=17 to=168 evalue=1.0e-19 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=37 to=162 evalue=3.5e-14 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD61_1_21

Not on your lists

16933..17472
DNA (540bp) protein (180aa)
16933..17472 + (rbs_motif=ATA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD53611.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_1_22

Not on your lists

comp(17477..19528)
DNA (2052bp) protein (684aa)
hypothetical protein
hypothetical protein
UvrABC system protein B n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BMN3_9BACT (db=UNIREF evalue=0.0 bit_score=676.0 identity=51.32 coverage=96.0526315789474)
seg (db=Seg db_id=seg from=647 to=657)
ACD61_1_23

Not on your lists

comp(19655..20110)
DNA (456bp) protein (152aa)
seg (db=Seg db_id=seg from=1 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKD53590.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 23 items

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