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ACD61_14

Alias: ACD61_83644.39271.11

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_14_1

Not on your lists

comp(188..982)
DNA (795bp) protein (265aa)
SEC-C motif domain-containing protein
SEC-C motif n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MT27_9FIRM (db=UNIREF evalue=2.0e-13 bit_score=79.7 identity=28.32 coverage=56.2264150943396)
Uncharacterized protein {ECO:0000313|EMBL:EKD52682.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_2

Not on your lists

comp(924..1982)
DNA (1059bp) protein (353aa)
DNA polymerase beta domain protein region (db=KEGG evalue=3.0e-14 bit_score=82.8 identity=26.44 coverage=67.9886685552408)
DNA polymerase beta domain protein region n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q3J4_CATAD (db=UNIREF evalue=3.0e-14 bit_score=82.8 identity=26.44 coverage=67.9886685552408)
seg (db=Seg db_id=seg from=40 to=53)
seg (db=Seg db_id=seg from=197 to=215)
ACD61_14_3

Not on your lists

comp(1984..2493)
DNA (510bp) protein (170aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=56 to=74)
seg (db=Seg db_id=seg from=14 to=29)
ACD61_14_4
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(2496..3143)
DNA (648bp) protein (216aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VP47_9CLOT (db=UNIREF evalue=4.0e-23 bit_score=111.0 identity=34.58 coverage=88.4259259259259)
seg (db=Seg db_id=seg from=90 to=105)
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=117 to=213 evalue=2.1e-20 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
ACD61_14_5

Not on your lists

3284..4288
DNA (1005bp) protein (335aa)
ATP-grasp enzyme, D-alanine-D-alanine ligase
seg (db=Seg db_id=seg from=26 to=39)
seg (db=Seg db_id=seg from=319 to=328)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=109 to=325 evalue=1.4e-37)
ACD61_14_6

Not on your lists

4344..5636
DNA (1293bp) protein (431aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V0F9_9ACTO (db=UNIREF evalue=3.0e-17 bit_score=93.6 identity=23.01 coverage=74.0139211136891)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=143 to=351 evalue=6.2e-20)
RimK (db=HMMPfam db_id=PF08443 from=160 to=334 evalue=0.00014 interpro_id=IPR013651 interpro_description=ATP-grasp fold, RimK-type)
ACD61_14_7

Not on your lists

5649..6158
DNA (510bp) protein (170aa)
putative fusion protein (N:peptidase-C:desuccinylase)
PEPTIDASE_C39 (db=ProfileScan db_id=PS50990 from=12 to=152 evalue=10.429 interpro_id=IPR005074 interpro_description=Peptidase C39, bacteriocin processing GO=Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233), Cellular Component: integral to membrane (GO:0016021))
putative fusion protein (N:peptidase-C:desuccinylase) alias=ACD61_C00014G00007,ACD61_83644.39271.11G0007,ACD61_83644.39271.11_7 id=91552 tax=ACD61 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD52674.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_8

Not on your lists

comp(6332..7096)
DNA (765bp) protein (255aa)
seg (db=Seg db_id=seg from=95 to=104)
Uncharacterized protein {ECO:0000313|EMBL:EKD52675.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_9

Not on your lists

7186..7566
DNA (381bp) protein (127aa)
7186..7566 + (rbs_motif=ATTAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_10

Not on your lists

comp(7612..8055)
DNA (444bp) protein (148aa)
7612..8055 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD52677.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_11

Not on your lists

comp(8118..8921)
DNA (804bp) protein (268aa)
Methyltransferase type 11 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIK7_9FIRM (db=UNIREF evalue=3.0e-15 bit_score=85.5 identity=26.89 coverage=92.5373134328358)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=6 to=267 evalue=7.6e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=29 to=146 evalue=4.5e-15)
ACD61_14_12

Not on your lists

8985..9662
DNA (678bp) protein (226aa)
nicotinamide mononucleotide transporter PnuC
Nicotinamide mononucleotide transporter PnuC n=2 Tax=Corynebacterium matruchotii RepID=C5VEV9_9CORY (db=UNIREF evalue=3.0e-47 bit_score=191.0 identity=45.33 coverage=92.9203539823009)
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=211)
ACD61_14_13

Not on your lists

9646..10653
DNA (1008bp) protein (336aa)
cytidyltransferase-related enzyme
ATPase/kinase involved in NAD metabolism-like protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DB8 (db=UNIREF evalue=3.0e-80 bit_score=302.0 identity=46.6 coverage=94.6428571428571)
seg (db=Seg db_id=seg from=248 to=263)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=155 to=321 evalue=1.5e-39)
ACD61_14_14

Not on your lists

comp(10631..11218)
DNA (588bp) protein (196aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4D3_9CHLA (db=UNIREF evalue=7.0e-46 bit_score=186.0 identity=49.24 coverage=98.9795918367347)
seg (db=Seg db_id=seg from=165 to=177)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=195 evalue=1.6e-16)
ACD61_14_15

Not on your lists

11474..12631
DNA (1158bp) protein (386aa)
AAA ATPase central domain protein
AAA ATPase central domain protein
AAA ATPase central domain protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5P7_GEOSF (db=UNIREF evalue=2.0e-101 bit_score=373.0 identity=49.75 coverage=97.6683937823834)
seg (db=Seg db_id=seg from=58 to=69)
ACD61_14_16

Not on your lists

12635..13288
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C3Y2_9PLAN (db=UNIREF evalue=4.0e-19 bit_score=98.2 identity=31.86 coverage=84.8623853211009)
HAD-like (db=superfamily db_id=SSF56784 from=5 to=209 evalue=1.0e-11)
Uncharacterized protein {ECO:0000313|EMBL:EKD52664.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_17

Not on your lists

13285..13545
DNA (261bp) protein (87aa)
13285..13545 + (rbs_motif=TAA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52665.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_18

Not on your lists

comp(13546..14397)
DNA (852bp) protein (284aa)
polysaccharide deacetylase
seg (db=Seg db_id=seg from=25 to=54)
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=85 to=271 evalue=1.3e-32 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
Polysacc_deac_1 (db=HMMPfam db_id=PF01522 from=126 to=249 evalue=1.1e-23 interpro_id=IPR002509 interpro_description=Polysaccharide deacetylase GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
ACD61_14_19

Not on your lists

14452..14907
DNA (456bp) protein (152aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKD52667.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_20

Not on your lists

14909..15010
DNA (102bp) protein (34aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKD52668.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_21

Not on your lists


15053..17413
DNA (2361bp) protein (787aa)
ATP-dependent protease La (EC:3.4.21.53)
ATP-dependent protease La (EC:3.4.21.53)
ATP-dependent protease La n=2 Tax=Sulfurihydrogenibium RepID=B2V6N0_SULSY (db=UNIREF evalue=0.0 bit_score=640.0 identity=50.27 coverage=94.9174078780178)
coiled-coil (db=Coil db_id=coil from=556 to=577 evalue=NA)
ACD61_14_22

Not on your lists

comp(17394..18059)
DNA (666bp) protein (222aa)
Prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVU4_9FIRM (db=UNIREF evalue=2.0e-25 bit_score=118.0 identity=37.23 coverage=77.9279279279279)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=216)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=184)
ACD61_14_23

Not on your lists

comp(18052..19293)
DNA (1242bp) protein (414aa)
Proline--tRNA ligase n=1 Tax=Turicibacter sp. PC909 RepID=D4W313_9FIRM (db=UNIREF evalue=2.0e-91 bit_score=340.0 identity=43.65 coverage=99.0338164251208)
prolyl-tRNA synthetase
prolyl-tRNA synthetase
PROLYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11451:SF3 from=38 to=413 evalue=8.0e-141)
ACD61_14_24

Not on your lists

19630..20229
DNA (600bp) protein (200aa)
restriction endonuclease
no description (db=Gene3D db_id=G3DSA:3.40.91.40 from=3 to=139 evalue=9.5e-23 interpro_id=IPR012311 interpro_description=Nuclease, putative, AF1548, N-terminal)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=6 to=139 evalue=4.2e-22 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
Mrr_cat (db=HMMPfam db_id=PF04471 from=15 to=119 evalue=6.8e-08 interpro_id=IPR007560 interpro_description=Restriction endonuclease, type IV-like, Mrr GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA restriction-modification system (GO:0009307))
ACD61_14_25
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

Not on your lists

20226..20609
DNA (384bp) protein (128aa)
seg (db=Seg db_id=seg from=91 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:KKT73399.1}; TaxID=1618384 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB1_44_6.;"
ACD61_14_26

Not on your lists

21039..21644
DNA (606bp) protein (202aa)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=190 evalue=4.2e-14)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=184 evalue=0.00011)
Uncharacterized protein {ECO:0000313|EMBL:EKD52657.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_27

Not on your lists

comp(21670..21981)
DNA (312bp) protein (104aa)
21670..21981 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD52658.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_28

Not on your lists

comp(22107..22397)
DNA (291bp) protein (97aa)
seg (db=Seg db_id=seg from=25 to=45)
Uncharacterized protein {ECO:0000313|EMBL:EKD52659.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_29

Not on your lists

comp(22468..22785)
DNA (318bp) protein (106aa)
22468..22785 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52660.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_14_30

Not on your lists

comp(22818..23555)
DNA (738bp) protein (246aa)
TrmH family RNA methyltransferase
rRNA_methyl_3: RNA methyltransferase, T (db=HMMTigr db_id=TIGR00186 from=6 to=243 evalue=5.7e-48 interpro_id=IPR004441 interpro_description=RNA methyltransferase TrmH, group 3 GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=54 to=242 evalue=9.3e-48)
RRNA METHYLASE (db=HMMPanther db_id=PTHR12029:SF7 from=54 to=242 evalue=9.3e-48)
Displaying items 1-30 of 48 in total

View Taxonomy