Alias: ACD61_85329.9108.9
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD61_23_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(1..177)
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histidine triad (HIT) protein
HIT-like (db=superfamily db_id=SSF54197 from=3 to=58 evalue=5.9e-18 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=2 to=58 evalue=1.5e-14 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
DcpS_C (db=HMMPfam db_id=PF11969 from=5 to=52 evalue=3.9e-12)
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ACD61_23_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(192..794)
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192..794 - (rbs_motif=ATA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52621.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD61_23_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(803..1885)
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putative M50B family peptidase (EC:3.4.24.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=332 to=351)
transmembrane_regions (db=TMHMM db_id=tmhmm from=281 to=303)
seg (db=Seg db_id=seg from=291 to=302)
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ACD61_23_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1913..2473)
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frr; ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=126 to=154 evalue=NA)
RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF) (db=HMMPanther db_id=PTHR20982:SF3 from=1 to=186 evalue=2.8e-60 interpro_id=IPR015998 interpro_description=Ribosome recycling factor, bacterial-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: translational termination (GO:0006415))
RIBOSOME RECYCLING FACTOR (db=HMMPanther db_id=PTHR20982 from=1 to=186 evalue=2.8e-60 interpro_id=IPR002661 interpro_description=Ribosome recycling factor GO=Biological Process: translation (GO:0006412))
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ACD61_23_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(2492..2827)
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seg (db=Seg db_id=seg from=26 to=39)
Uncharacterized protein {ECO:0000313|EMBL:EKD52624.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD61_23_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2906..3676)
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2906..3676 - (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52625.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD61_23_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(3753..4205)
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Translation elongation factor EFTs/EF1B dimerization
EF_TS_1 (db=PatternScan db_id=PS01126 from=8 to=23 evalue=0.0 interpro_id=IPR018101 interpro_description=Translation elongation factor Ts, conserved site GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ELONGATION FACTOR TS (db=HMMPanther db_id=PTHR11741 from=3 to=146 evalue=5.4e-35 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
Elongation factor Ts (EF-Ts), dimerisation domain (db=superfamily db_id=SSF54713 from=53 to=149 evalue=2.0e-29 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
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ACD61_23_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(4221..5195)
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30S ribosomal protein S2
seg (db=Seg db_id=seg from=5 to=89)
RIBOSOMAL_S2_1 (db=PatternScan db_id=PS00962 from=92 to=103 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsB_bact: ribosomal protein S2 (db=HMMTigr db_id=TIGR01011 from=91 to=313 evalue=4.9e-75 interpro_id=IPR005706 interpro_description=Ribosomal protein S2, bacteria/mitochondria/plastid GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD61_23_9
uncultured bacterium, Bacteria
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Not on your lists |
5348..5767
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5348..5767 + (rbs_motif=AAT rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52628.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD61_23_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(5820..6575)
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folD; putative methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
THF_DHG_CYH_2 (db=PatternScan db_id=PS00767 from=233 to=241 evalue=0.0 interpro_id=IPR020867 interpro_description=Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
Aminoacid dehydrogenase-like, N-terminal domain (db=superfamily db_id=SSF53223 from=1 to=115 evalue=1.2e-20)
FORMATE-TETRAHYDROFOLATE LIGASE (db=HMMPanther db_id=PTHR10025:SF4 from=2 to=251 evalue=6.7e-19)
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ACD61_23_11
uncultured bacterium, Bacteria
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Not on your lists |
6722..8083
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Zn-finger in Ran binding protein and others n=2 Tax=Coprococcus RepID=D5HH73_9FIRM (db=UNIREF evalue=1.0e-09 bit_score=68.6 identity=26.61 coverage=39.4273127753304)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
seg (db=Seg db_id=seg from=316 to=337)
ZF_RANBP2_1 (db=PatternScan db_id=PS01358 from=57 to=76 evalue=0.0 interpro_id=IPR001876 interpro_description=Zinc finger, RanBP2-type GO=Cellular Component: intracellular (GO:0005622), Molecular Function: zinc ion binding (GO:0008270))
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ACD61_23_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(8861..9073)
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seg (db=Seg db_id=seg from=55 to=65)
Uncharacterized protein {ECO:0000313|EMBL:EKD52619.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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