ggKbase home page

ACD61_33

Alias: ACD61_222003.8967.7

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_33_1
Microgenomates bacterium GW2011_GWC1_44_10, Microgenomates, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
DNA gyrase, subunit A, type II topoisomerase n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MLW1_9BACT (db=UNIREF evalue=9.0e-44 bit_score=178.0 identity=67.21 coverage=88.4615384615385)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Type II DNA topoisomerase (db=superfamily db_id=SSF56719 from=22 to=130 evalue=5.5e-49 interpro_id=IPR013760 interpro_description=DNA topoisomerase, type IIA, central GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
DNA_topoisoIV (db=HMMPfam db_id=PF00521 from=53 to=130 evalue=1.9e-39 interpro_id=IPR002205 interpro_description=DNA topoisomerase, type IIA, subunit A/C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
ACD61_33_2
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(401..1399)
DNA (999bp) protein (333aa)
inorganic diphosphatase (EC:3.6.1.1)
seg (db=Seg db_id=seg from=53 to=67)
seg (db=Seg db_id=seg from=173 to=187)
coiled-coil (db=Coil db_id=coil from=199 to=220 evalue=NA)
ACD61_33_3
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(1462..3474)
DNA (2013bp) protein (671aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG8_THET1 (db=UNIREF evalue=6.0e-166 bit_score=588.0 identity=53.27 coverage=93.7406855439642)
seg (db=Seg db_id=seg from=597 to=614)
ACD61_33_4
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

3512..4147
DNA (636bp) protein (212aa)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=32 to=114 evalue=9.6e-11)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=26 to=111 evalue=1.3e-07)
DNA polymerase III, delta subunit Tax=GWC2_OP11_44_18
ACD61_33_5
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

4174..5934
DNA (1761bp) protein (587aa)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=324 to=335)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=162 to=584 evalue=4.5e-103)
ACD61_33_6
Microgenomates bacterium GW2011_GWC1_44_10, Microgenomates, Bacteria

Not on your lists

5943..7016
DNA (1074bp) protein (358aa)
Type IV pilus retraction protein PilT n=2 Tax=Dictyoglomus RepID=B5YDI3_DICT6 (db=UNIREF evalue=1.0e-94 bit_score=350.0 identity=50.0 coverage=96.6480446927374)
type IV pilus retraction protein PilT
type IV pilus retraction protein PilT
pilT_fam: twitching motility protein (db=HMMTigr db_id=TIGR01420 from=7 to=349 evalue=5.1e-167 interpro_id=IPR006321 interpro_description=Pilus retraction protein PilT GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
ACD61_33_7
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

7453..8262
DNA (810bp) protein (270aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=241 to=263)
seg (db=Seg db_id=seg from=41 to=58)
seg (db=Seg db_id=seg from=92 to=104)
ACD61_33_8
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

8316..8921
DNA (606bp) protein (202aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=20 to=38)
Pili subunits (db=superfamily db_id=SSF54523 from=15 to=154 evalue=7.9e-12)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=12 to=35 evalue=1.2e-06 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
Displaying 8 items

View Taxonomy