ggKbase home page

ACD61_38

Alias: ACD61_24830.19977.11

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_38_1

Not on your lists

77..1870
DNA (1794bp) protein (598aa)
Threonyl-tRNA synthetase n=3 Tax=Chloroflexus RepID=A9WJX4_CHLAA (db=UNIREF evalue=1.0e-156 bit_score=557.0 identity=47.28 coverage=96.1538461538462)
threonyl-tRNA synthetase
threonyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=529 to=550 evalue=NA)
ACD61_38_2

Not on your lists

1870..2619
DNA (750bp) protein (250aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=189 evalue=2.5e-21)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=21 to=157 evalue=1.7e-16)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=52 to=141 evalue=1.8e-16 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD61_38_3

Not on your lists

2632..3849
DNA (1218bp) protein (406aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrS: tyrosyl-tRNA synthetase (db=HMMTigr db_id=TIGR00234 from=4 to=405 evalue=2.0e-88 interpro_id=IPR002307 interpro_description=Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tyrosine-tRNA ligase activity (GO:0004831), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tyrosyl-tRNA aminoacylation (GO:0006437))
TYROSYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11766 from=7 to=404 evalue=6.3e-88 interpro_id=IPR002307 interpro_description=Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tyrosine-tRNA ligase activity (GO:0004831), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tyrosyl-tRNA aminoacylation (GO:0006437))
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=6 to=319 evalue=1.6e-77)
ACD61_38_4

Not on your lists

3856..4344
DNA (489bp) protein (163aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein
seg (db=Seg db_id=seg from=102 to=118)
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=4 to=161 evalue=1.6e-31 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
YbaK (db=HMMPfam db_id=PF04073 from=26 to=153 evalue=1.4e-24 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
ACD61_38_5

Not on your lists


4531..5745
DNA (1215bp) protein (405aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
seg (db=Seg db_id=seg from=41 to=50)
hisS: histidyl-tRNA synthetase (db=HMMTigr db_id=TIGR00442 from=5 to=393 evalue=8.5e-122 interpro_id=IPR015807 interpro_description=Histidyl-tRNA synthetase, class IIa, subgroup GO=Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
Histidyl-tRNA synthetase (db=HMMPIR db_id=PIRSF001549 from=1 to=404 evalue=5.1e-121 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
ACD61_38_6

Not on your lists

5825..6085
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=68 to=86)
seg (db=Seg db_id=seg from=45 to=57)
Uncharacterized protein {ECO:0000313|EMBL:EKD53265.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_38_7

Not on your lists

6092..6412
DNA (321bp) protein (107aa)
6092..6412 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD53266.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_38_8

Not on your lists

comp(6466..7851)
DNA (1386bp) protein (462aa)
hypothetical protein
hypothetical protein
Glycyl-tRNA synthetase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7S1_SPHTD (db=UNIREF evalue=3.0e-129 bit_score=465.0 identity=51.51 coverage=98.7012987012987)
seg (db=Seg db_id=seg from=427 to=442)
ACD61_38_9

Not on your lists


comp(7866..9194)
DNA (1329bp) protein (443aa)
Aspartyl-tRNA synthetase n=1 Tax=Frankia sp. EAN1pec RepID=A8LBC0_FRASN (db=UNIREF evalue=8.0e-93 bit_score=344.0 identity=42.24 coverage=97.0654627539503)
aspS3; aspartate--tRNA ligase AspS (EC:6.1.1.12)
aspS3; aspartate--tRNA ligase AspS (EC:6.1.1.12)
ASPARTYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594:SF6 from=82 to=433 evalue=2.9e-110)
ACD61_38_10

Not on your lists

9267..10313
DNA (1047bp) protein (349aa)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH80_9FIRM (db=UNIREF evalue=3.0e-42 bit_score=176.0 identity=33.33 coverage=82.8080229226361)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE (db=HMMPanther db_id=PTHR21071 from=5 to=347 evalue=7.4e-22 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Biological Process: oxidation reduction (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.30.465.10 from=126 to=252 evalue=4.8e-20 interpro_id=IPR016169 interpro_description=CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
ACD61_38_11
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

10328..10867
DNA (540bp) protein (180aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase
seg (db=Seg db_id=seg from=137 to=149)
no description (db=Gene3D db_id=G3DSA:3.65.10.10 from=22 to=136 evalue=3.2e-24 interpro_id=IPR001986 interpro_description=3-phosphoshikimate 1-carboxyvinyltransferase, core GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
EPT/RTPC-like (db=superfamily db_id=SSF55205 from=4 to=136 evalue=4.1e-24 interpro_id=IPR013792 interpro_description=RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO=Molecular Function: catalytic activity (GO:0003824))
ACD61_38_12

Not on your lists

10885..11682
DNA (798bp) protein (266aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
EPT/RTPC-like (db=superfamily db_id=SSF55205 from=1 to=265 evalue=4.8e-43 interpro_id=IPR013792 interpro_description=RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO=Molecular Function: catalytic activity (GO:0003824))
AROM/DEHYDROQUINATE SYNTHASE (db=HMMPanther db_id=PTHR21090 from=1 to=263 evalue=1.8e-41)
UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE (db=HMMPanther db_id=PTHR21090:SF4 from=1 to=263 evalue=1.8e-41 interpro_id=IPR005750 interpro_description=UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO=Molecular Function: transferase activity (GO:0016740), Biological Process: UDP-N-acetylgalactosamine biosynthetic process (GO:0019277))
ACD61_38_13

Not on your lists

comp(11714..12469)
DNA (756bp) protein (252aa)
alpha/beta hydrolase family protein
seg (db=Seg db_id=seg from=217 to=230)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=3 to=242 evalue=2.7e-49)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=5 to=242 evalue=2.4e-44)
ACD61_38_14

Not on your lists


12526..14859
DNA (2334bp) protein (778aa)
Leucyl-tRNA synthetase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=SYL_ALKOO (db=UNIREF evalue=0.0 bit_score=780.0 identity=48.75 coverage=97.5578406169666)
leuS; leucyl-tRNA synthetase
leuS; leucyl-tRNA synthetase
seg (db=Seg db_id=seg from=761 to=772)
ACD61_38_15

Not on your lists

14912..15643
DNA (732bp) protein (244aa)
nhaA3; DSBA-like thioredoxin domain-containing protein
Putative uncharacterized protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096V0_STIAU (db=UNIREF evalue=1.0e-31 bit_score=139.0 identity=41.23 coverage=76.6393442622951)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=56 to=240 evalue=4.9e-33 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD61_38_16

Not on your lists

15735..16601
DNA (867bp) protein (289aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=274)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=212)
ACD61_38_17

Not on your lists

16601..17905
DNA (1305bp) protein (435aa)
alpha-L-glutamate ligase
seg (db=Seg db_id=seg from=384 to=399)
seg (db=Seg db_id=seg from=276 to=289)
seg (db=Seg db_id=seg from=26 to=41)
ACD61_38_18

Not on your lists

18080..19015
DNA (936bp) protein (312aa)
alpha-L-glutamate ligase
seg (db=Seg db_id=seg from=230 to=245)
coiled-coil (db=Coil db_id=coil from=155 to=176 evalue=NA)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=98 to=297 evalue=1.2e-24)
ACD61_38_19

Not on your lists

19012..19932
DNA (921bp) protein (307aa)
Alpha-L-glutamate ligase, RimK family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT07_9BACT (db=UNIREF evalue=6.0e-12 bit_score=75.1 identity=27.8 coverage=91.5309446254072)
alpha-L-glutamate ligase, RimK family; K05844 ribosomal protein S6 modification protein (db=KEGG evalue=8.0e-10 bit_score=68.2 identity=28.18 coverage=85.3420195439739)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=114 to=306 evalue=4.9e-17)
RimK (db=HMMPfam db_id=PF08443 from=154 to=305 evalue=7.4e-12 interpro_id=IPR013651 interpro_description=ATP-grasp fold, RimK-type)
Displaying 19 items

View Taxonomy