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ACD61_91

Alias: ACD61_28944.7968.13

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_91_1

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3..332
DNA (330bp) protein (110aa)
GTP-binding protein TypA
GTP-binding protein TypA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2547 (db=UNIREF evalue=3.0e-30 bit_score=133.0 identity=61.0 coverage=90.0)
GTP-binding protein TypA {ECO:0000313|EMBL:EKD53209.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_91_2

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632..1162
DNA (531bp) protein (177aa)
632..1162 + (rbs_motif=TAGTA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD53210.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_91_3
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

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comp(1262..1747)
DNA (486bp) protein (162aa)
seg (db=Seg db_id=seg from=16 to=28)
Uncharacterized protein {ECO:0000313|EMBL:KKT49457.1}; TaxID=1618392 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWC2_44_18.;"
ACD61_91_4

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comp(2058..2576)
DNA (519bp) protein (173aa)
hypothetical protein VparK_03019 n=1 Tax=Vibrio parahaemolyticus K5030 RepID=UPI0001BCB39A (db=UNIREF evalue=2.0e-15 bit_score=85.1 identity=38.1 coverage=82.0809248554913)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD53208.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_91_5

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comp(2870..3316)
DNA (447bp) protein (149aa)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=49 to=70 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=19 to=148 evalue=1.5e-12 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=23 to=70 evalue=2.0e-08 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=23 to=106 evalue=8.3e-07 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD61_91_6

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comp(3448..4620)
DNA (1173bp) protein (391aa)
RfaG; glycosyltransferase
seg (db=Seg db_id=seg from=272 to=283)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=378 evalue=5.8e-39)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=390 evalue=4.4e-28)
ACD61_91_7

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4796..6100
DNA (1305bp) protein (435aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=201 to=223)
transmembrane_regions (db=TMHMM db_id=tmhmm from=236 to=255)
transmembrane_regions (db=TMHMM db_id=tmhmm from=265 to=287)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=311)
ACD61_91_8

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6175..6267
DNA (93bp) protein (31aa)
seg (db=Seg db_id=seg from=10 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD53203.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_91_9

Not on your lists

6275..6676
DNA (402bp) protein (134aa)
beta-lactamase domain-containing protein
seg (db=Seg db_id=seg from=23 to=37)
seg (db=Seg db_id=seg from=46 to=59)
Excalibur (db=HMMPfam db_id=PF05901 from=88 to=126 evalue=9.3e-06 interpro_id=IPR008613 interpro_description=Excalibur calcium-binding domain)
ACD61_91_10

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comp(6684..7091)
DNA (408bp) protein (136aa)
mscL; large conductance mechanosensitive channel protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=12 to=25)
ACD61_91_11

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comp(7220..7615)
DNA (396bp) protein (132aa)
seg (db=Seg db_id=seg from=86 to=100)
Uncharacterized protein {ECO:0000313|EMBL:EKD53206.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_91_12

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7773..7973
DNA (201bp) protein (67aa)
hypothetical protein
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN (db=UNIREF evalue=3.0e-13 bit_score=77.4 identity=65.57 coverage=88.0597014925373)
CSD (db=HMMPfam db_id=PF00313 from=1 to=64 evalue=3.5e-21 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=66 evalue=3.2e-18 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676))
Displaying 12 items

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