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ACD15_16

Alias: ACD15_415.62771.17

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Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_16_31

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27114..27710
DNA (597bp) protein (199aa)
hypothetical protein
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=1 to=196 evalue=3.2e-29)
RibD_C (db=HMMPfam db_id=PF01872 from=2 to=183 evalue=3.6e-25 interpro_id=IPR002734 interpro_description=Bacterial bifunctional deaminase-reductase, C-terminal GO=Molecular Function: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity (GO:0008703), Biological Process: riboflavin biosynthetic process (GO:0009231))
no description (db=Gene3D db_id=G3DSA:3.40.430.10 from=2 to=195 evalue=3.6e-16)
ACD15_16_32

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27931..29091
DNA (1161bp) protein (387aa)
hypothetical protein
seg (db=Seg db_id=seg from=282 to=316)
seg (db=Seg db_id=seg from=245 to=260)
seg (db=Seg db_id=seg from=136 to=155)
ACD15_16_33

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comp(29260..30018)
DNA (759bp) protein (253aa)
transcriptional regulator TrmB
Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK (db=UNIREF evalue=8.0e-16 bit_score=87.8 identity=28.39 coverage=87.7470355731225)
coiled-coil (db=Coil db_id=coil from=86 to=107 evalue=NA)
TrmB (db=HMMPfam db_id=PF01978 from=19 to=70 evalue=8.8e-11 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
ACD15_16_34

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30151..30690
DNA (540bp) protein (180aa)
seg (db=Seg db_id=seg from=41 to=60)
coiled-coil (db=Coil db_id=coil from=31 to=59 evalue=NA)
Phage_Mu_Gam (db=HMMPfam db_id=PF07352 from=21 to=163 evalue=6.8e-24 interpro_id=IPR009951 interpro_description=Bacteriophage Mu Gam like GO=Molecular Function: double-stranded DNA binding (GO:0003690), Biological Process: DNA protection (GO:0042262))
Uncharacterized protein {ECO:0000313|EMBL:EKE11137.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_35

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30808..31902
DNA (1095bp) protein (365aa)
ribosome-associated GTPase
ribosome-associated GTPase
Ribosome-associated GTPase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ASQ1_9FLAO (db=UNIREF evalue=5.0e-89 bit_score=331.0 identity=46.22 coverage=93.6986301369863)
seg (db=Seg db_id=seg from=349 to=360)
ACD15_16_36
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

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32150..32674
DNA (525bp) protein (175aa)
1,3-propanediol dehydrogenase (EC:1.1.1.202)
seg (db=Seg db_id=seg from=151 to=166)
Dehydroquinate synthase-like (db=superfamily db_id=SSF56796 from=1 to=150 evalue=2.1e-44)
Fe-ADH (db=HMMPfam db_id=PF00465 from=2 to=150 evalue=8.2e-40 interpro_id=IPR001670 interpro_description=Alcohol dehydrogenase, iron-type GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
ACD15_16_37

Not on your lists

32685..33302
DNA (618bp) protein (206aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2N3_DESAS (db=UNIREF evalue=5.0e-83 bit_score=310.0 identity=72.06 coverage=98.5436893203884)
alcohol dehydrogenase (EC:1.1.1.1)
alcohol dehydrogenase (EC:1.1.1.1)
ADH_IRON_2 (db=PatternScan db_id=PS00060 from=81 to=101 evalue=0.0 interpro_id=IPR018211 interpro_description=Alcohol dehydrogenase, iron-type, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
ACD15_16_38

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comp(33514..34542)
DNA (1029bp) protein (343aa)
L-asparaginase (EC:3.5.1.1)
seg (db=Seg db_id=seg from=92 to=106)
Glutaminase/Asparaginase (db=superfamily db_id=SSF53774 from=1 to=341 evalue=1.1e-70 interpro_id=IPR006034 interpro_description=Asparaginase/glutaminase GO=Biological Process: cellular amino acid metabolic process (GO:0006520))
Asparaginase (db=HMMPfam db_id=PF00710 from=3 to=324 evalue=3.9e-67 interpro_id=IPR006034 interpro_description=Asparaginase/glutaminase GO=Biological Process: cellular amino acid metabolic process (GO:0006520))
ACD15_16_39

Not on your lists

34716..35456
DNA (741bp) protein (247aa)
transcriptional regulator TrmB
seg (db=Seg db_id=seg from=75 to=96)
seg (db=Seg db_id=seg from=153 to=160)
TrmB (db=HMMPfam db_id=PF01978 from=6 to=74 evalue=2.6e-17 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
ACD15_16_40

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comp(35701..36231)
DNA (531bp) protein (177aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=4 to=159 evalue=6.3e-19)
Uncharacterized protein {ECO:0000313|EMBL:EKE11081.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD15_415.62771.17G0040,ACD15_415.62771.17_40,ACD15_C00016G00040 id=8248 tax=ACD15 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria organism_group=OD1-i organism_desc=OD1-i
ACD15_16_41

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36596..36787
DNA (192bp) protein (64aa)
seg (db=Seg db_id=seg from=40 to=59)
DUF1059 (db=HMMPfam db_id=PF06348 from=1 to=57 evalue=8.0e-08 interpro_id=IPR009409 interpro_description=Protein of unknown function DUF1059)
Uncharacterized protein {ECO:0000313|EMBL:EKE11082.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_42

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comp(36872..37396)
DNA (525bp) protein (175aa)
36872..37396 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11083.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_43

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comp(37564..37791)
DNA (228bp) protein (76aa)
seg (db=Seg db_id=seg from=60 to=72)
Uncharacterized protein {ECO:0000313|EMBL:EKE11084.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_44

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comp(38134..41112)
DNA (2979bp) protein (993aa)
hypothetical protein
hypothetical protein
Copper-translocating P-type ATPase n=3 Tax=Clostridium thermocellum RepID=A3DGJ0_CLOTH (db=UNIREF evalue=0.0 bit_score=756.0 identity=54.05 coverage=74.6223564954683)
seg (db=Seg db_id=seg from=923 to=935)
ACD15_16_45

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comp(41131..41331)
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=17 to=27)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=65 evalue=4.6e-07 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA (db=HMMPfam db_id=PF00403 from=6 to=45 evalue=9.6e-05 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA_2 (db=ProfileScan db_id=PS50846 from=3 to=66 evalue=11.54 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
ACD15_16_46

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comp(41384..43213)
DNA (1830bp) protein (610aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
seg (db=Seg db_id=seg from=465 to=489)
ACD15_16_47

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comp(43297..43767)
DNA (471bp) protein (157aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKE11088.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_48

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comp(43952..44950)
DNA (999bp) protein (333aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAH7_SPHTD (db=UNIREF evalue=8.0e-100 bit_score=367.0 identity=53.47 coverage=99.0990990990991)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=220 to=236 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
psort confirmed cytoplasmic kelly wrighton (11/15/12)
ACD15_16_49

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comp(44978..45292)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCJ5_9FIRM (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=51.95 coverage=72.3809523809524)
hypothetical protein
seg (db=Seg db_id=seg from=3 to=13)
DUF2249 (db=HMMPfam db_id=PF10006 from=35 to=103 evalue=2.0e-27 interpro_id=IPR018720 interpro_description=Protein of unknown function DUF2249)
ACD15_16_50

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45492..45866
DNA (375bp) protein (125aa)
RNA signal recognition particle 4.5S RNA
Uncharacterised conserved protein, UCP007028 type (db=HMMPIR db_id=PIRSF007028 from=1 to=124 evalue=1.2e-50 interpro_id=IPR009874 interpro_description=Protein of unknown function DUF1428)
DUF1428 (db=HMMPfam db_id=PF07237 from=4 to=111 evalue=2.4e-34 interpro_id=IPR009874 interpro_description=Protein of unknown function DUF1428)
Uncharacterized protein {ECO:0000313|EMBL:EKE11091.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_51

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46016..46264
DNA (249bp) protein (83aa)
46016..46264 + (rbs_motif=TAA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11092.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_52

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comp(46345..46944)
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase
3mg: DNA-3-methyladenine glycosylase (db=HMMTigr db_id=TIGR00567 from=4 to=196 evalue=1.1e-67 interpro_id=IPR003180 interpro_description=Methylpurine-DNA glycosylase (MPG) GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: alkylbase DNA N-glycosylase activity (GO:0003905), Biological Process: base-excision repair (GO:0006284))
Pur_DNA_glyco (db=HMMPfam db_id=PF02245 from=6 to=194 evalue=8.0e-66 interpro_id=IPR003180 interpro_description=Methylpurine-DNA glycosylase (MPG) GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: alkylbase DNA N-glycosylase activity (GO:0003905), Biological Process: base-excision repair (GO:0006284))
no description (db=Gene3D db_id=G3DSA:3.10.300.10 from=4 to=196 evalue=2.9e-62 interpro_id=IPR003180 interpro_description=Methylpurine-DNA glycosylase (MPG) GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: alkylbase DNA N-glycosylase activity (GO:0003905), Biological Process: base-excision repair (GO:0006284))
ACD15_16_53

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comp(47029..47274)
DNA (246bp) protein (82aa)
transglycosylase
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
ACD15_16_54

Not on your lists

47493..47891
DNA (399bp) protein (133aa)
Mannose-6-phosphate isomerase
seg (db=Seg db_id=seg from=118 to=132)
coiled-coil (db=Coil db_id=coil from=112 to=133 evalue=NA)
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=128 evalue=4.5e-19 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
ACD15_16_55

Not on your lists

47913..48221
DNA (309bp) protein (103aa)
cupin
RmlC-like cupins (db=superfamily db_id=SSF51182 from=5 to=101 evalue=3.1e-17 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=35 to=98 evalue=3.5e-05 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=19 to=101 evalue=0.00058 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD15_16_56

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48320..49138
DNA (819bp) protein (273aa)
diguanylate cyclase
seg (db=Seg db_id=seg from=182 to=194)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=92 to=267 evalue=4.6e-44 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
GGDEF (db=HMMPfam db_id=PF00990 from=89 to=260 evalue=1.6e-37 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
ACD15_16_57

Not on your lists

49275..49769
DNA (495bp) protein (165aa)
hypothetical protein
AHSA1 (db=HMMPfam db_id=PF08327 from=19 to=161 evalue=1.5e-30 interpro_id=IPR013538 interpro_description=Activator of Hsp90 ATPase homologue 1-like GO=Biological Process: response to stress (GO:0006950))
Bet v1-like (db=superfamily db_id=SSF55961 from=7 to=164 evalue=9.5e-29)
no description (db=Gene3D db_id=G3DSA:3.30.530.40 from=6 to=154 evalue=1.8e-06)
ACD15_16_58

Not on your lists

comp(49843..51252)
DNA (1410bp) protein (470aa)
RelA/SpoT family (p)ppGpp synthetase
seg (db=Seg db_id=seg from=120 to=134)
seg (db=Seg db_id=seg from=74 to=85)
GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE (db=HMMPanther db_id=PTHR21262 from=105 to=437 evalue=1.7e-57)
ACD15_16_59

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51503..52474
DNA (972bp) protein (324aa)
(p)ppGpp synthetase I, SpoT/RelA (EC:2.7.6.5)
GTP diphosphokinase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LW28_9FIRM (db=UNIREF evalue=2.0e-26 bit_score=123.0 identity=29.34 coverage=92.2839506172839)
seg (db=Seg db_id=seg from=6 to=18)
coiled-coil (db=Coil db_id=coil from=189 to=217 evalue=NA)
ACD15_16_60

Not on your lists

52434..55214
DNA (2781bp) protein (927aa)
Sensor protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRS2_9DELT (db=UNIREF evalue=5.0e-43 bit_score=180.0 identity=35.97 coverage=28.6947141316073)
PAS domain protein
seg (db=Seg db_id=seg from=419 to=430)
seg (db=Seg db_id=seg from=17 to=31)
Displaying items 31-60 of 67 in total

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