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ACD15_16

Alias: ACD15_415.62771.17

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_16_1

Not on your lists

comp(50..1609)
DNA (1560bp) protein (520aa)
hypothetical protein
no description (db=HMMSmart db_id=SM00857 from=3 to=156 evalue=1.6e-27 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=1 to=157 evalue=1.0e-19 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase (db=HMMPfam db_id=PF00239 from=3 to=156 evalue=2.6e-19 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
ACD15_16_2

Not on your lists

comp(1715..3388)
DNA (1674bp) protein (558aa)
transcriptional regulator
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J920_9ARCH (db=UNIREF evalue=5.0e-37 bit_score=159.0 identity=28.61 coverage=71.1469534050179)
seg (db=Seg db_id=seg from=2 to=12)
AAA_4 (db=HMMPfam db_id=PF04326 from=21 to=139 evalue=1.7e-08 interpro_id=IPR007421 interpro_description=ATPase, AAA-4 GO=Molecular Function: ATP binding (GO:0005524))
ACD15_16_3

Not on your lists

comp(3402..3611)
DNA (210bp) protein (70aa)
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=17 to=65 evalue=3.2e-12 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=16 to=63 evalue=2.4e-07 interpro_id=IPR009061 interpro_description=Putative DNA binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
HTH_11 (db=HMMPfam db_id=PF08279 from=13 to=40 evalue=6.3e-06 interpro_id=IPR013196 interpro_description=Helix-turn-helix, type 11)
Uncharacterized protein {ECO:0000313|EMBL:EKE11106.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_4

Not on your lists

comp(3583..4071)
DNA (489bp) protein (163aa)
coiled-coil (db=Coil db_id=coil from=27 to=95 evalue=NA)
coiled-coil (db=Coil db_id=coil from=142 to=163 evalue=NA)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE11107.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_5

Not on your lists

comp(4131..5240)
DNA (1110bp) protein (370aa)
recombinase XerC
Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1G5_9BRAD (db=UNIREF evalue=2.0e-48 bit_score=196.0 identity=35.26 coverage=87.2972972972973)
seg (db=Seg db_id=seg from=296 to=307)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=130 to=340 evalue=1.1e-22 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
ACD15_16_6

Not on your lists

comp(5254..5661)
DNA (408bp) protein (136aa)
5254..5661 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11109.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_7

Not on your lists

comp(5760..5927)
DNA (168bp) protein (56aa)
5760..5927 - (rbs_motif=TATTA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11110.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_8

Not on your lists

comp(6024..6767)
DNA (744bp) protein (248aa)
6024..6767 - (rbs_motif=AAT rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11111.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_9

Not on your lists

6968..7267
DNA (300bp) protein (100aa)
coiled-coil (db=Coil db_id=coil from=77 to=98 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE11112.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_10

Not on your lists

7303..8049
DNA (747bp) protein (249aa)
seg (db=Seg db_id=seg from=64 to=80)
seg (db=Seg db_id=seg from=21 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=104)
ACD15_16_11

Not on your lists

comp(8126..9445)
DNA (1320bp) protein (440aa)
8126..9445 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11114.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_12

Not on your lists

9621..10193
DNA (573bp) protein (191aa)
seg (db=Seg db_id=seg from=131 to=150)
seg (db=Seg db_id=seg from=70 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=165)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=128)
ACD15_16_13

Not on your lists

10171..12495
DNA (2325bp) protein (775aa)
seg (db=Seg db_id=seg from=304 to=321)
seg (db=Seg db_id=seg from=404 to=420)
Uncharacterized protein {ECO:0000313|EMBL:EKE11116.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD15_16_14

Not on your lists

12642..13181
DNA (540bp) protein (180aa)
seg (db=Seg db_id=seg from=64 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD15_16_15

Not on your lists

13233..14165
DNA (933bp) protein (311aa)
hypothetical protein BoklC_20579 n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A8A3C (db=UNIREF evalue=2.0e-18 bit_score=97.1 identity=24.54 coverage=84.887459807074)
hypothetical protein (db=KEGG evalue=4.0e-13 bit_score=79.0 identity=27.72 coverage=79.4212218649518)
Sec-C motif (db=superfamily db_id=SSF103642 from=4 to=27 evalue=3.3e-06)
SEC-C (db=HMMPfam db_id=PF02810 from=6 to=22 evalue=5.1e-06 interpro_id=IPR004027 interpro_description=SEC-C motif)
ACD15_16_16

Not on your lists

comp(14824..15060)
DNA (237bp) protein (79aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE11119.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_17

Not on your lists

comp(15064..15759)
DNA (696bp) protein (232aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Bermanella marisrubri RepID=Q1N2P1_9GAMM (db=UNIREF evalue=7.0e-15 bit_score=84.0 identity=32.34 coverage=68.9655172413793)
hypothetical protein (db=KEGG evalue=2.0e-14 bit_score=82.4 identity=28.99 coverage=83.6206896551724)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKE11120.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_18

Not on your lists

comp(15801..16826)
DNA (1026bp) protein (342aa)
15801..16826 - (rbs_motif=AATAA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11121.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_19

Not on your lists

17171..18151
DNA (981bp) protein (327aa)
transposase
seg (db=Seg db_id=seg from=150 to=161)
TRANSPOSASE_IS30 (db=PatternScan db_id=PS01043 from=267 to=283 evalue=0.0 interpro_id=IPR001598 interpro_description=Transposase, IS30, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=172 to=322 evalue=3.7e-22 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD15_16_20

Not on your lists

18117..18230
DNA (114bp) protein (38aa)
seg (db=Seg db_id=seg from=21 to=36)
Uncharacterized protein {ECO:0000313|EMBL:EKE11123.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_21

Not on your lists

18299..18502
DNA (204bp) protein (68aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKE11124.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_22

Not on your lists

18530..18961
DNA (432bp) protein (144aa)
18530..18961 + (rbs_motif=TAA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11125.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_23

Not on your lists

18958..19065
DNA (108bp) protein (36aa)
seg (db=Seg db_id=seg from=2 to=14)
Uncharacterized protein {ECO:0000313|EMBL:EKE11126.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_24

Not on your lists

19199..19864
DNA (666bp) protein (222aa)
19199..19864 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11127.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_25

Not on your lists

20111..20653
DNA (543bp) protein (181aa)
seg (db=Seg db_id=seg from=55 to=66)
seg (db=Seg db_id=seg from=13 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKE11128.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_26

Not on your lists

20671..21111
DNA (441bp) protein (147aa)
seg (db=Seg db_id=seg from=67 to=80)
seg (db=Seg db_id=seg from=5 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
coiled-coil (db=Coil db_id=coil from=34 to=55 evalue=NA)
ACD15_16_27

Not on your lists

comp(21133..24030)
DNA (2898bp) protein (966aa)
Putative uncharacterized protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NE70_9ACTO (db=UNIREF evalue=9.0e-80 bit_score=302.0 identity=24.9 coverage=98.6542443064182)
hypothetical protein
seg (db=Seg db_id=seg from=476 to=492)
seg (db=Seg db_id=seg from=719 to=735)
ACD15_16_28

Not on your lists

comp(24040..24819)
DNA (780bp) protein (260aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
coiled-coil (db=Coil db_id=coil from=30 to=51 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE11131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_16_29

Not on your lists

25076..26020
DNA (945bp) protein (315aa)
UPI0001D5A05B related cluster n=1 Tax=unknown RepID=UPI0001D5A05B (db=UNIREF evalue=1.0e-133 bit_score=479.0 identity=69.75 coverage=99.3650793650794)
filamentation induced by cAMP protein Fic
filamentation induced by cAMP protein Fic
gb def: Huntingtin interacting protein E-like protein (db=HMMPanther db_id=PTHR13504:SF9 from=5 to=306 evalue=1.3e-85)
ACD15_16_30

Not on your lists

26403..26906
DNA (504bp) protein (168aa)
26403..26906 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11133.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 67 in total

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