ggKbase home page

ACD15_19

Alias: ACD15_8787.35293.16

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_19_1

Not on your lists

3..620
DNA (618bp) protein (206aa)
adenosylhomocysteinase (EC:3.3.1.1)
ADENOSYLHOMOCYSTEINASE (db=HMMPanther db_id=PTHR23420 from=1 to=205 evalue=5.0e-143 interpro_id=IPR000043 interpro_description=S-adenosyl-L-homocysteine hydrolase GO=Molecular Function: adenosylhomocysteinase activity (GO:0004013), Biological Process: one-carbon metabolic process (GO:0006730))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=127 evalue=1.5e-62)
AdoHcyase_NAD (db=HMMPfam db_id=PF00670 from=1 to=127 evalue=6.8e-60 interpro_id=IPR015878 interpro_description=S-adenosyl-L-homocysteine hydrolase, NAD binding)
ACD15_19_2

Not on your lists

1510..3372
DNA (1863bp) protein (621aa)
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase
Sensor protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDZ8_DESAA (db=UNIREF evalue=3.0e-101 bit_score=373.0 identity=40.62 coverage=81.1594202898551)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=1 to=594 evalue=3.3e-81)
ACD15_19_3

Not on your lists

3527..4699
DNA (1173bp) protein (391aa)
membrane protein of unknown function
transmembrane_regions (db=TMHMM db_id=tmhmm from=344 to=363)
transmembrane_regions (db=TMHMM db_id=tmhmm from=368 to=385)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=104)
ACD15_19_4

Not on your lists

4912..5676
DNA (765bp) protein (255aa)
Transcriptional regulator, TrmB
Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHZ5_9BACT (db=UNIREF evalue=4.0e-16 bit_score=88.6 identity=31.33 coverage=55.2941176470588)
seg (db=Seg db_id=seg from=210 to=219)
TrmB (db=HMMPfam db_id=PF01978 from=16 to=82 evalue=6.7e-16 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
ACD15_19_5

Not on your lists

5701..5988
DNA (288bp) protein (96aa)
5701..5988 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10709.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_6
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

6252..6827
DNA (576bp) protein (192aa)
seg (db=Seg db_id=seg from=174 to=189)
seg (db=Seg db_id=seg from=43 to=64)
seg (db=Seg db_id=seg from=21 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD15_19_7

Not on your lists

6832..8055
DNA (1224bp) protein (408aa)
Sodium/hydrogen exchanger
seg (db=Seg db_id=seg from=154 to=166)
seg (db=Seg db_id=seg from=18 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD15_19_8

Not on your lists

8333..8812
DNA (480bp) protein (160aa)
ugd-2; UDP-glucose dehydrogenase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=18 to=156 evalue=2.6e-22)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=18 to=151 evalue=5.7e-19 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
UDPG_MGDP_dh_N (db=HMMPfam db_id=PF03721 from=73 to=151 evalue=1.5e-13 interpro_id=IPR001732 interpro_description=UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
ACD15_19_9

Not on your lists

8793..9251
DNA (459bp) protein (153aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE (db=HMMPanther db_id=PTHR11374 from=5 to=146 evalue=6.4e-20 interpro_id=IPR014028 interpro_description=UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
UDPG_MGDP_dh (db=HMMPfam db_id=PF00984 from=45 to=142 evalue=1.2e-18 interpro_id=IPR014026 interpro_description=UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
6-phosphogluconate dehydrogenase C-terminal domain-like (db=superfamily db_id=SSF48179 from=45 to=144 evalue=2.5e-18 interpro_id=IPR008927 interpro_description=6-phosphogluconate dehydrogenase, C-terminal-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
ACD15_19_10

Not on your lists

9306..12026
DNA (2721bp) protein (907aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. EuI1c RepID=D1VND1_9ACTO (db=UNIREF evalue=4.0e-87 bit_score=326.0 identity=41.27 coverage=40.9040793825799)
family 2 glycosyl transferase
family 2 glycosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
ACD15_19_11

Not on your lists

12068..13219
DNA (1152bp) protein (384aa)
Putative secreted protein n=1 Tax=Streptomyces coelicolor RepID=Q9RKE0_STRCO (db=UNIREF evalue=5.0e-87 bit_score=325.0 identity=48.33 coverage=83.8541666666667)
SCE65.34c; hypothetical protein
SCE65.34c; hypothetical protein
seg (db=Seg db_id=seg from=1 to=18)
ACD15_19_12

Not on your lists

13341..13838
DNA (498bp) protein (166aa)
hypothetical protein
seg (db=Seg db_id=seg from=6 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
DM13 (db=HMMPfam db_id=PF10517 from=63 to=161 evalue=3.3e-26 interpro_id=IPR019545 interpro_description=Electron transfer DM13)
ACD15_19_13

Not on your lists

14018..15706
DNA (1689bp) protein (563aa)
seg (db=Seg db_id=seg from=486 to=497)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
Uncharacterized protein {ECO:0000313|EMBL:EKE10686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_14

Not on your lists

15827..17116
DNA (1290bp) protein (430aa)
capsular polysaccharide biosynthesis protein
seg (db=Seg db_id=seg from=397 to=421)
seg (db=Seg db_id=seg from=308 to=322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
ACD15_19_15

Not on your lists

17113..18063
DNA (951bp) protein (317aa)
family 2 glycosyl transferase
Glycosyl transferase family 2 n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1STJ9_9BURK (db=UNIREF evalue=8.0e-60 bit_score=234.0 identity=41.07 coverage=98.4227129337539)
seg (db=Seg db_id=seg from=234 to=251)
seg (db=Seg db_id=seg from=210 to=226)
ACD15_19_16

Not on your lists

18069..19172
DNA (1104bp) protein (368aa)
group 1 glycosyl transferase (EC:2.4.1.-)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=365 evalue=1.1e-54)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=365 evalue=1.8e-44)
Glycos_transf_1 (db=HMMPfam db_id=PF00534 from=189 to=346 evalue=3.7e-31 interpro_id=IPR001296 interpro_description=Glycosyl transferase, group 1 GO=Biological Process: biosynthetic process (GO:0009058))
ACD15_19_17

Not on your lists

19169..19822
DNA (654bp) protein (218aa)
methyltransferase type 11
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=9 to=209 evalue=1.1e-08)
methyltransferase type 11 alias=ACD15_8787.35293.16G0017,ACD15_8787.35293.16_17,ACD15_C00019G00017 id=8347 tax=ACD15 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_group=OD1-i organism_desc=OD1-i
Methyltransferase type 11 {ECO:0000313|EMBL:EKE10690.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_18

Not on your lists

19828..20742
DNA (915bp) protein (305aa)
Glycosyltransferase, probably involved in cell wall biogenesis
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=285 evalue=2.4e-35)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=7 to=217 evalue=1.8e-24)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=7 to=178 evalue=5.7e-23 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD15_19_19

Not on your lists

20829..21563
DNA (735bp) protein (245aa)
Two-component response regulator
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6Z3_9BACT (db=UNIREF evalue=1.0e-14 bit_score=83.6 identity=34.01 coverage=74.2857142857143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=135 to=154)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
ACD15_19_20

Not on your lists

21554..23497
DNA (1944bp) protein (648aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=436 to=458)
transmembrane_regions (db=TMHMM db_id=tmhmm from=619 to=641)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=167 to=178)
ACD15_19_21

Not on your lists

23722..24225
DNA (504bp) protein (168aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=112 to=134)
ACD15_19_22

Not on your lists

24287..25906
DNA (1620bp) protein (540aa)
hypothetical protein
seg (db=Seg db_id=seg from=165 to=177)
seg (db=Seg db_id=seg from=129 to=140)
seg (db=Seg db_id=seg from=73 to=87)
ACD15_19_23

Not on your lists

25903..26697
DNA (795bp) protein (265aa)
seg (db=Seg db_id=seg from=211 to=224)
seg (db=Seg db_id=seg from=26 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=257)
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=228)
ACD15_19_24

Not on your lists

26884..27246
DNA (363bp) protein (121aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Cna protein B-type domain (db=superfamily db_id=SSF49478 from=31 to=91 evalue=8.1e-10 interpro_id=IPR008970 interpro_description=Collagen-binding surface protein Cna, B-type domain GO=Molecular Function: binding (GO:0005488))
Cna_B (db=HMMPfam db_id=PF05738 from=45 to=103 evalue=1.0e-09 interpro_id=IPR008454 interpro_description=Collagen-binding surface protein Cna-like, B-type domain)
Uncharacterized protein {ECO:0000313|EMBL:EKE10697.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_25

Not on your lists

27332..28129
DNA (798bp) protein (266aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKE10698.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_26

Not on your lists

comp(28282..28593)
DNA (312bp) protein (104aa)
28282..28593 - (rbs_motif=TAATA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10699.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_27

Not on your lists

28727..29179
DNA (453bp) protein (151aa)
28727..29179 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE10700.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_28

Not on your lists

29485..29937
DNA (453bp) protein (151aa)
29485..29937 + (rbs_motif=TAA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10701.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_19_29

Not on your lists

30094..30975
DNA (882bp) protein (294aa)
pyrophosphatase
HAD-like (db=superfamily db_id=SSF56784 from=75 to=289 evalue=6.5e-34)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=75 to=278 evalue=2.5e-19)
Hydrolase (db=HMMPfam db_id=PF00702 from=75 to=248 evalue=5.0e-16 interpro_id=IPR005834 interpro_description=Haloacid dehalogenase-like hydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD15_19_30

Not on your lists

30978..31604
DNA (627bp) protein (209aa)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=173 evalue=8.9e-15)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=7 to=207 evalue=4.2e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKE10703.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 33 in total

View Taxonomy