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ACD15_38

Alias: ACD15_13236.30772.16

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_38_1

Not on your lists

comp(100..1278)
DNA (1179bp) protein (393aa)
Multidrug-efflux transporter n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E92_9ARCH (db=UNIREF evalue=1.0e-14 bit_score=84.3 identity=27.14 coverage=52.4173027989822)
transmembrane_regions (db=TMHMM db_id=tmhmm from=299 to=318)
transmembrane_regions (db=TMHMM db_id=tmhmm from=338 to=360)
transmembrane_regions (db=TMHMM db_id=tmhmm from=364 to=381)
ACD15_38_2

Not on your lists


comp(1311..2630)
DNA (1320bp) protein (440aa)
aspC; aspartyl-tRNA synthetase
aspC; aspartyl-tRNA synthetase
Aspartyl/asparaginyl-tRNA synthetase n=2 Tax=Clostridium acetobutylicum RepID=Q97DB5_CLOAB (db=UNIREF evalue=5.0e-108 bit_score=395.0 identity=46.14 coverage=96.3636363636364)
aspS_arch: aspartyl-tRNA synthetase (db=HMMTigr db_id=TIGR00458 from=3 to=439 evalue=1.1e-140 interpro_id=IPR004523 interpro_description=Aspartyl-tRNA synthetase, class IIb, archea/euk type GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aspartate-tRNA ligase activity (GO:0004815), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: aspartyl-tRNA aminoacylation (GO:0006422))
ACD15_38_3

Not on your lists

comp(2656..3462)
DNA (807bp) protein (269aa)
Response regulator receiver modulated metal dependent phosphohydrolase
Sensor protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1Y2_9PROT (db=UNIREF evalue=5.0e-23 bit_score=111.0 identity=31.85 coverage=91.82156133829)
coiled-coil (db=Coil db_id=coil from=116 to=137 evalue=NA)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=137 evalue=5.9e-33 interpro_id=IPR011006 interpro_description=CheY-like)
ACD15_38_4

Not on your lists

comp(3529..5331)
DNA (1803bp) protein (601aa)
ABC transporter-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=278 to=300)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
ACD15_38_5

Not on your lists

comp(5399..6646)
DNA (1248bp) protein (416aa)
prolyl-tRNA synthetase
prolyl-tRNA synthetase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C7 (db=UNIREF evalue=5.0e-80 bit_score=301.0 identity=61.6 coverage=56.7307692307692)
seg (db=Seg db_id=seg from=50 to=60)
ACD15_38_6

Not on your lists

comp(6881..7933)
DNA (1053bp) protein (351aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=11 Tax=Clostridium RepID=A5I4K0_CLOBH (db=UNIREF evalue=8.0e-113 bit_score=410.0 identity=60.7 coverage=96.5811965811966)
seg (db=Seg db_id=seg from=66 to=75)
ACD15_38_7

Not on your lists

comp(8006..8215)
DNA (210bp) protein (70aa)
8006..8215 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11737.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_8

Not on your lists


comp(8301..9170)
DNA (870bp) protein (290aa)
hydroxymethylbutenyl pyrophosphate reductase
ispH_lytB: 4-hydroxy-3-methylbut-2-enyl dip (db=HMMTigr db_id=TIGR00216 from=9 to=287 evalue=2.0e-96 interpro_id=IPR003451 interpro_description=LytB protein GO=Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway (GO:0019288), Biological Process: oxidation reduction (GO:0055114))
LYTB (db=HMMPfam db_id=PF02401 from=10 to=286 evalue=1.3e-85 interpro_id=IPR003451 interpro_description=LytB protein GO=Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway (GO:0019288), Biological Process: oxidation reduction (GO:0055114))
IspH (db=HAMAP db_id=MF_00191 from=8 to=288 evalue=30.858 interpro_id=IPR003451 interpro_description=LytB protein GO=Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway (GO:0019288), Biological Process: oxidation reduction (GO:0055114))
ACD15_38_9

Not on your lists

comp(9187..9849)
DNA (663bp) protein (221aa)
seg (db=Seg db_id=seg from=145 to=190)
seg (db=Seg db_id=seg from=97 to=115)
seg (db=Seg db_id=seg from=18 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
ACD15_38_10

Not on your lists

comp(10182..11579)
DNA (1398bp) protein (466aa)
coiled-coil (db=Coil db_id=coil from=311 to=332 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=8 to=22)
seg (db=Seg db_id=seg from=28 to=48)
ACD15_38_11

Not on your lists

comp(11760..11966)
DNA (207bp) protein (69aa)
11760..11966 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11741.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_12

Not on your lists

comp(12538..12801)
DNA (264bp) protein (88aa)
12538..12801 - (rbs_motif=AAT rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11722.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_13

Not on your lists

comp(12943..13305)
DNA (363bp) protein (121aa)
large-conductance mechanosensitive channel
seg (db=Seg db_id=seg from=80 to=94)
seg (db=Seg db_id=seg from=12 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
ACD15_38_14

Not on your lists

comp(13444..13875)
DNA (432bp) protein (144aa)
CheY-like (db=superfamily db_id=SSF52172 from=11 to=137 evalue=1.8e-13 interpro_id=IPR011006 interpro_description=CheY-like)
Response_reg (db=HMMPfam db_id=PF00072 from=16 to=125 evalue=3.7e-11 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=15 to=137 evalue=6.8e-09)
no description (db=HMMSmart db_id=SM00448 from=14 to=133 evalue=0.00088 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD15_38_15

Not on your lists

comp(14055..14447)
DNA (393bp) protein (131aa)
Sensor protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN74_9PROT (db=UNIREF evalue=7.0e-10 bit_score=66.2 identity=38.64 coverage=64.8854961832061)
Response_reg (db=HMMPfam db_id=PF00072 from=13 to=115 evalue=2.3e-17 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=7 to=128 evalue=2.6e-17 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=7 to=114 evalue=7.4e-13)
ACD15_38_16

Not on your lists

comp(14639..14926)
DNA (288bp) protein (96aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=64 to=85 evalue=NA)
seg (db=Seg db_id=seg from=3 to=11)
DUF3467 (db=HMMPfam db_id=PF11950 from=3 to=82 evalue=8.5e-21 interpro_id=IPR021857 interpro_description=Protein of unknown function DUF3467)
ACD15_38_17

Not on your lists

comp(14988..15557)
DNA (570bp) protein (190aa)
NUDIX hydrolase
NUDIX hydrolase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YU35_9CYAN (db=UNIREF evalue=4.0e-37 bit_score=157.0 identity=41.24 coverage=92.1052631578947)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=82 to=103 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=5 to=179 evalue=4.2e-47 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD15_38_18

Not on your lists

15731..16150
DNA (420bp) protein (140aa)
15731..16150 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_19

Not on your lists

comp(16255..16941)
DNA (687bp) protein (229aa)
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase (EC:1.1.1.193)
seg (db=Seg db_id=seg from=119 to=129)
RibD_C (db=HMMPfam db_id=PF01872 from=7 to=221 evalue=7.0e-41 interpro_id=IPR002734 interpro_description=Bacterial bifunctional deaminase-reductase, C-terminal GO=Molecular Function: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity (GO:0008703), Biological Process: riboflavin biosynthetic process (GO:0009231))
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=7 to=228 evalue=3.1e-39)
ACD15_38_20

Not on your lists

comp(16957..17550)
DNA (594bp) protein (198aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMN0_9DELT (db=UNIREF evalue=3.0e-50 bit_score=201.0 identity=61.33 coverage=89.8989898989899)
seg (db=Seg db_id=seg from=166 to=180)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=28 to=103 evalue=1.9e-09 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
ACD15_38_21

Not on your lists

19744..20004
DNA (261bp) protein (87aa)
19744..20004 + (rbs_motif=TAAT rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11717.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_22

Not on your lists

comp(20498..20914)
DNA (417bp) protein (139aa)
putative small heat shock protein
HSP20-like chaperones (db=superfamily db_id=SSF49764 from=3 to=137 evalue=3.0e-35 interpro_id=IPR008978 interpro_description=HSP20-like chaperone)
HEAT SHOCK PROTEIN 16 (db=HMMPanther db_id=PTHR11527:SF15 from=5 to=137 evalue=1.3e-31)
SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY (db=HMMPanther db_id=PTHR11527 from=5 to=137 evalue=1.3e-31)
ACD15_38_23

Not on your lists

comp(20976..21881)
DNA (906bp) protein (302aa)
molecular chaperone GrpE (heat shock protein)
GrpE protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH24_CLOAI (db=UNIREF evalue=6.0e-18 bit_score=95.1 identity=33.09 coverage=43.046357615894)
seg (db=Seg db_id=seg from=260 to=275)
seg (db=Seg db_id=seg from=141 to=153)
ACD15_38_24

Not on your lists

comp(21871..22002)
DNA (132bp) protein (44aa)
seg (db=Seg db_id=seg from=4 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKE11720.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_25

Not on your lists

comp(22024..22761)
DNA (738bp) protein (246aa)
hypothetical protein
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 (db=UNIREF evalue=3.0e-27 bit_score=125.0 identity=33.89 coverage=93.9024390243902)
seg (db=Seg db_id=seg from=88 to=101)
coiled-coil (db=Coil db_id=coil from=88 to=109 evalue=NA)
ACD15_38_26

Not on your lists

comp(23226..23687)
DNA (462bp) protein (154aa)
23226..23687 - (rbs_motif=AATAA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11708.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_27

Not on your lists

comp(23701..23946)
DNA (246bp) protein (82aa)
23701..23946 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11709.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_38_28

Not on your lists

comp(23943..24194)
DNA (252bp) protein (84aa)
hypothetical protein
DUF37 (db=HMMPfam db_id=PF01809 from=1 to=76 evalue=9.5e-27 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
TIGR00278: conserved hypothetical protein Y (db=HMMTigr db_id=TIGR00278 from=6 to=83 evalue=7.6e-17 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Y388_NITEU_Q82XA0; (db=BlastProDom db_id=PD004225 from=32 to=76 evalue=1.0e-14 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
ACD15_38_29

Not on your lists

24293..25201
DNA (909bp) protein (303aa)
Mg2 transporter protein CorA family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=267)
transmembrane_regions (db=TMHMM db_id=tmhmm from=277 to=296)
coiled-coil (db=Coil db_id=coil from=217 to=238 evalue=NA)
ACD15_38_30

Not on your lists

25249..26703
DNA (1455bp) protein (485aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteinyl-tRNA synthetase n=2 Tax=Chlorobaculum RepID=SYC_CHLTE (db=UNIREF evalue=5.0e-110 bit_score=401.0 identity=43.57 coverage=95.6701030927835)
seg (db=Seg db_id=seg from=304 to=317)
Displaying items 1-30 of 34 in total

View Taxonomy