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ACD15_42

Alias: ACD15_67582.19398.15

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_42_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)
2..73 - (rbs_motif=ATA rbs_spacer=4bp)
ACD15_42_2

Not on your lists

comp(344..505)
DNA (162bp) protein (54aa)
344..505 - (rbs_motif=TAA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10856.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_3

Not on your lists

602..1042
DNA (441bp) protein (147aa)
GCN5-related N-acetyltransferase
Acetyltransferase, GNAT family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNS1_BACOV (db=UNIREF evalue=1.0e-40 bit_score=168.0 identity=61.48 coverage=80.9523809523809)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKE10857.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_4

Not on your lists

1051..1146
DNA (96bp) protein (32aa)
1051..1146 + (rbs_motif=AATAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10858.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_5

Not on your lists

1666..2001
DNA (336bp) protein (112aa)
pyrophosphatase
Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CU40_9BACE (db=UNIREF evalue=1.0e-35 bit_score=152.0 identity=68.87 coverage=93.75)
seg (db=Seg db_id=seg from=55 to=66)
Predicted pyrophosphohydrolase, MazG-related, YpjD type (db=HMMPIR db_id=PIRSF029904 from=1 to=110 evalue=8.9e-67 interpro_id=IPR012359 interpro_description=NTP pyrophosphohydrolase MazG-related, YpjD)
ACD15_42_6

Not on your lists

2794..3255
DNA (462bp) protein (154aa)
hypothetical protein
seg (db=Seg db_id=seg from=11 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
ACD15_42_7

Not on your lists

3267..3698
DNA (432bp) protein (144aa)
histidine triad (HIT) protein
Histidine triad (HIT) protein n=1 Tax=Geobacter sp. M18 RepID=C6MQ66_9DELT (db=UNIREF evalue=2.0e-15 bit_score=84.7 identity=38.94 coverage=73.6111111111111)
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=16 to=107 evalue=1.6e-22 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
seg (db=Seg db_id=seg from=7 to=20)
ACD15_42_8

Not on your lists

3828..4364
DNA (537bp) protein (179aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMN0_9DELT (db=UNIREF evalue=1.0e-19 bit_score=99.4 identity=38.8 coverage=93.854748603352)
seg (db=Seg db_id=seg from=38 to=49)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=8 to=102 evalue=1.6e-05 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
ACD15_42_9

Not on your lists

4428..4943
DNA (516bp) protein (172aa)
isochorismatase hydrolase (EC:3.3.2.1)
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=1 to=157 evalue=8.1e-41 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Isochorismatase (db=HMMPfam db_id=PF00857 from=5 to=155 evalue=2.8e-39 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=2 to=156 evalue=5.8e-39 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD15_42_10

Not on your lists

4980..5672
DNA (693bp) protein (231aa)
4980..5672 + (rbs_motif=TAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE10864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_11

Not on your lists

5760..6593
DNA (834bp) protein (278aa)
Glutamate racemase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EFB7_9SPHI (db=UNIREF evalue=2.0e-64 bit_score=249.0 identity=45.11 coverage=93.1654676258993)
glutamate racemase
ASP_GLU_RACEMASE_1 (db=PatternScan db_id=PS00923 from=72 to=80 evalue=0.0 interpro_id=IPR018187 interpro_description=Asp/Glu racemase, active site GO=Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855))
GLUTAMATE RACEMASE (db=HMMPanther db_id=PTHR21198 from=2 to=274 evalue=1.8e-66)
ACD15_42_12

Not on your lists

comp(6768..6983)
DNA (216bp) protein (72aa)
6768..6983 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE10854.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_13

Not on your lists

7912..8451
DNA (540bp) protein (180aa)
Bifunctional deaminase-reductase protein
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=2 to=177 evalue=1.8e-30)
no description (db=Gene3D db_id=G3DSA:3.40.430.10 from=1 to=176 evalue=4.3e-24)
RibD_C (db=HMMPfam db_id=PF01872 from=4 to=164 evalue=4.5e-14 interpro_id=IPR002734 interpro_description=Bacterial bifunctional deaminase-reductase, C-terminal GO=Molecular Function: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity (GO:0008703), Biological Process: riboflavin biosynthetic process (GO:0009231))
ACD15_42_14

Not on your lists

8500..8754
DNA (255bp) protein (85aa)
Endo/excinuclease amino terminal domain protein n=1 Tax=Bermanella marisrubri RepID=Q1MZE8_9GAMM (db=UNIREF evalue=1.0e-20 bit_score=102.0 identity=57.5 coverage=92.9411764705882)
excinuclease ABC subunit C domain-containing protein
GIY-YIG (db=HMMPfam db_id=PF01541 from=1 to=73 evalue=2.1e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=73 evalue=4.3e-11 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD15_42_15

Not on your lists

8741..9484
DNA (744bp) protein (248aa)
Exonuclease RNase T and DNA polymerase III
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=4 to=196 evalue=2.5e-28 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=5 to=163 evalue=6.9e-25)
no description (db=HMMSmart db_id=SM00479 from=5 to=166 evalue=6.6e-21 interpro_id=IPR006055 interpro_description=Exonuclease GO=Molecular Function: exonuclease activity (GO:0004527), Cellular Component: intracellular (GO:0005622))
ACD15_42_16

Not on your lists

9540..10031
DNA (492bp) protein (164aa)
rubrerythrin
no description (db=Gene3D db_id=G3DSA:1.20.1260.10 from=3 to=125 evalue=9.9e-38 interpro_id=IPR012347 interpro_description=Ferritin-related)
Ferritin-like (db=superfamily db_id=SSF47240 from=2 to=127 evalue=5.3e-30 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation reduction (GO:0055114))
Rubrerythrin (db=HMMPfam db_id=PF02915 from=5 to=119 evalue=2.3e-19 interpro_id=IPR003251 interpro_description=Rubrerythrin GO=Molecular Function: metal ion binding (GO:0046872))
ACD15_42_17

Not on your lists

10077..10187
DNA (111bp) protein (37aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE10844.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_18

Not on your lists

10212..10616
DNA (405bp) protein (135aa)
seg (db=Seg db_id=seg from=10 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil (db=Coil db_id=coil from=30 to=65 evalue=NA)
DivIC (db=HMMPfam db_id=PF04977 from=21 to=96 evalue=1.9e-12 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
ACD15_42_19

Not on your lists

10637..11686
DNA (1050bp) protein (350aa)
prsA; Foldase protein PrsA (EC:5.2.1.8)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
coiled-coil (db=Coil db_id=coil from=178 to=213 evalue=NA)
seg (db=Seg db_id=seg from=99 to=116)
ACD15_42_20

Not on your lists

11756..11938
DNA (183bp) protein (61aa)
4Fe-4S ferredoxin
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=11 to=22 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=1 to=59 evalue=2.1e-11)
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=4 to=60 evalue=1.4e-10)
ACD15_42_21

Not on your lists

12069..13397
DNA (1329bp) protein (443aa)
Trypsin
seg (db=Seg db_id=seg from=37 to=47)
seg (db=Seg db_id=seg from=126 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
ACD15_42_22

Not on your lists

13463..14203
DNA (741bp) protein (247aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=216)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=184)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=158)
ACD15_42_23

Not on your lists

14286..15461
DNA (1176bp) protein (392aa)
protease Do
seg (db=Seg db_id=seg from=73 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=2 to=25)
ACD15_42_24

Not on your lists

15737..17140
DNA (1404bp) protein (468aa)
seg (db=Seg db_id=seg from=177 to=189)
LysM domain (db=superfamily db_id=SSF54106 from=122 to=171 evalue=5.8e-06)
LysM (db=HMMPfam db_id=PF01476 from=126 to=161 evalue=0.0013 interpro_id=IPR018392 interpro_description=Peptidoglycan-binding lysin domain GO=Biological Process: cell wall macromolecule catabolic process (GO:0016998))
Uncharacterized protein {ECO:0000313|EMBL:EKE10851.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_25

Not on your lists

17190..18455
DNA (1266bp) protein (422aa)
seg (db=Seg db_id=seg from=12 to=24)
seg (db=Seg db_id=seg from=224 to=241)
LysM domain (db=superfamily db_id=SSF54106 from=34 to=80 evalue=5.9e-06)
Uncharacterized protein {ECO:0000313|EMBL:EKE10852.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_42_26

Not on your lists

18716..19282
DNA (567bp) protein (189aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
seg (db=Seg db_id=seg from=102 to=111)
Uncharacterized protein {ECO:0000313|EMBL:EKE10853.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 26 items

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