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ACD15_50

Alias: ACD15_254.11563.18

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_50_1

Not on your lists

comp(48..266)
DNA (219bp) protein (73aa)
48..266 - (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11353.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_50_2

Not on your lists

comp(512..1699)
DNA (1188bp) protein (396aa)
D-alanine--D-alanine ligase n=2 Tax=Thermoanaerobacteraceae RepID=DDL_THETN (db=UNIREF evalue=1.0e-79 bit_score=300.0 identity=41.41 coverage=94.4444444444444)
DdlA2; D-alanine--D-alanine ligase
DdlA2; D-alanine--D-alanine ligase
coiled-coil (db=Coil db_id=coil from=352 to=373 evalue=NA)
ACD15_50_3

Not on your lists

comp(1713..3077)
DNA (1365bp) protein (455aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
seg (db=Seg db_id=seg from=55 to=67)
ACD15_50_4

Not on your lists

comp(3085..3843)
DNA (759bp) protein (253aa)
alpha/beta hydrolase family protein
Alpha/beta hydrolase fold protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR29_BACS4 (db=UNIREF evalue=3.0e-35 bit_score=152.0 identity=40.81 coverage=85.3754940711462)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=149)
seg (db=Seg db_id=seg from=123 to=141)
ACD15_50_5

Not on your lists

3962..4183
DNA (222bp) protein (74aa)
seg (db=Seg db_id=seg from=2 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
PGPGW (db=HMMPfam db_id=PF09656 from=21 to=67 evalue=5.8e-07 interpro_id=IPR019099 interpro_description=Protein of unknown function, PGPGW, transmembrane)
Uncharacterized protein {ECO:0000313|EMBL:EKE11357.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_50_6

Not on your lists

comp(4204..5013)
DNA (810bp) protein (270aa)
ABC transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=79)
seg (db=Seg db_id=seg from=50 to=61)
seg (db=Seg db_id=seg from=91 to=111)
ACD15_50_7

Not on your lists

comp(5015..5767)
DNA (753bp) protein (251aa)
Mn/Zn ABC transporter ATPase
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=230 evalue=8.5e-71)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=5 to=221 evalue=5.9e-56)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=244 evalue=3.0e-51)
ACD15_50_8

Not on your lists

comp(5770..6711)
DNA (942bp) protein (314aa)
metal ion ABC transporter periplasmic protein
seg (db=Seg db_id=seg from=33 to=42)
coiled-coil (db=Coil db_id=coil from=168 to=189 evalue=NA)
seg (db=Seg db_id=seg from=10 to=23)
ACD15_50_9

Not on your lists

comp(6717..7133)
DNA (417bp) protein (139aa)
ferric uptake regulator, Fur family; K03711 Fur family transcriptional regulator, ferric uptake regulator (db=KEGG evalue=5.0e-13 bit_score=76.3 identity=33.08 coverage=93.5251798561151)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=135 evalue=1.5e-22)
FUR (db=HMMPfam db_id=PF01475 from=16 to=130 evalue=5.9e-18 interpro_id=IPR002481 interpro_description=Ferric-uptake regulator GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKE11361.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_50_10

Not on your lists

7607..9430
DNA (1824bp) protein (608aa)
DNA primase
DNA primase
seg (db=Seg db_id=seg from=374 to=385)
dnaG: DNA primase (db=HMMTigr db_id=TIGR01391 from=1 to=414 evalue=1.5e-135 interpro_id=IPR006295 interpro_description=DNA primase, DnaG GO=Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication, synthesis of RNA primer (GO:0006269))
ACD15_50_11

Not on your lists

9462..10916
DNA (1455bp) protein (485aa)
RNA polymerase, sigma 38 subunit, RpoS
RNA polymerase, sigma 38 subunit, RpoS
RNA polymerase sigma factor n=3 Tax=Clostridium thermocellum RepID=A3DDV0_CLOTH (db=UNIREF evalue=2.0e-101 bit_score=373.0 identity=56.91 coverage=71.5463917525773)
seg (db=Seg db_id=seg from=383 to=395)
ACD15_50_12

Not on your lists

11107..11433
DNA (327bp) protein (109aa)
seg (db=Seg db_id=seg from=32 to=45)
seg (db=Seg db_id=seg from=14 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE11364.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 12 items

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