Alias: ACD15_10375.40630.16
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD15_52_1
uncultured bacterium, Bacteria
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Not on your lists |
137..850
|
chromosome segregation and condensation protein ScpA
seg (db=Seg db_id=seg from=73 to=86)
seg (db=Seg db_id=seg from=16 to=26)
coiled-coil (db=Coil db_id=coil from=77 to=101 evalue=NA)
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ACD15_52_2
uncultured bacterium, Bacteria
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Not on your lists |
868..1407
|
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ACD15_52_3
uncultured bacterium, Bacteria
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Not on your lists |
1430..2467
|
serine-type d-ala-d-ala carboxypeptidase (EC:3.4.16.4)
seg (db=Seg db_id=seg from=40 to=56)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=81 to=341 evalue=5.5e-55)
Peptidase_S11 (db=HMMPfam db_id=PF00768 from=81 to=325 evalue=8.8e-52 interpro_id=IPR001967 interpro_description=Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type D-Ala-D-Ala carboxypeptidase activity (GO:0009002))
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ACD15_52_4
uncultured bacterium, Bacteria
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Not on your lists |
2510..3610
|
hypothetical protein
seg (db=Seg db_id=seg from=290 to=302)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=138)
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ACD15_52_5
uncultured bacterium, Bacteria
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Not on your lists |
3645..4682
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phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M955_9BACT (db=UNIREF evalue=1.0e-62 bit_score=243.0 identity=39.24 coverage=99.4219653179191)
seg (db=Seg db_id=seg from=97 to=114)
seg (db=Seg db_id=seg from=184 to=197)
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ACD15_52_6
uncultured bacterium, Bacteria
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Not on your lists |
5225..5476
|
Excinuclease ABC C subunit domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRY6_9DELT (db=UNIREF evalue=2.0e-08 bit_score=61.2 identity=43.37 coverage=95.2380952380952)
hypothetical protein; K07461 putative endonuclease (db=KEGG evalue=5.0e-08 bit_score=60.1 identity=46.84 coverage=85.7142857142857)
GIY-YIG (db=HMMPfam db_id=PF01541 from=3 to=72 evalue=1.1e-13 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=71 evalue=2.1e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
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ACD15_52_7
uncultured bacterium, Bacteria
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Not on your lists |
5711..5896
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Preprotein translocase, SecE subunit n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L3F3_9BACT (db=UNIREF evalue=3.0e-08 bit_score=60.8 identity=48.08 coverage=82.258064516129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=7 to=35 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=3 to=58 evalue=7.4e-18 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
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ACD15_52_8
uncultured bacterium, Bacteria
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Not on your lists |
5972..6517
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nusG; transcription antitermination factor
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=2.1e-81 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=9 to=117 evalue=4.3e-43 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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ACD15_52_9
uncultured bacterium, Bacteria
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Not on your lists |
6659..7081
|
rplK; 50S ribosomal protein L11
RIBOSOMAL_L11 (db=PatternScan db_id=PS00359 from=126 to=140 evalue=0.0 interpro_id=IPR020785 interpro_description=Ribosomal protein L11, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=140 evalue=1.0e-83 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=HMMSmart db_id=SM00649 from=9 to=140 evalue=1.2e-75 interpro_id=IPR000911 interpro_description=Ribosomal protein L11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD15_52_10
uncultured bacterium, Bacteria
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Not on your lists |
7124..7840
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rplA; 50S ribosomal protein L1
Ribosomal protein L1 n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=D6HJ39_9FIRM (db=UNIREF evalue=5.0e-61 bit_score=237.0 identity=53.57 coverage=92.4686192468619)
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=132 to=150 evalue=0.0 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=16 to=238 evalue=2.2e-111 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
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ACD15_52_11
uncultured bacterium, Bacteria
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Not on your lists |
7993..9402
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hypothetical protein
TPR repeat-containing protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV70_METML (db=UNIREF evalue=7.0e-12 bit_score=75.9 identity=24.58 coverage=67.0212765957447)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=6 to=22)
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ACD15_52_12
uncultured bacterium, Bacteria
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Not on your lists |
9409..10002
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transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=84 to=133)
Uncharacterized protein {ECO:0000313|EMBL:EKE11894.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_52_13
uncultured bacterium, Bacteria
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Not on your lists |
10125..10685
|
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN2_9EURY (db=UNIREF evalue=3.0e-15 bit_score=84.7 identity=30.73 coverage=94.1176470588235)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=182 evalue=2.6e-18)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=181 evalue=8.3e-05)
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ACD15_52_14
uncultured bacterium, Bacteria
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Not on your lists |
10783..11346
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hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=186 evalue=4.7e-17)
NUCLEOTIDE KINASE (db=HMMPanther db_id=PTHR23359 from=1 to=61 evalue=2.1e-05 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=61 evalue=0.00059)
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ACD15_52_15
uncultured bacterium, Bacteria
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Not on your lists |
11421..12047
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rfaE bifunctional protein, domain II
Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AUM7_9BACE (db=UNIREF evalue=4.0e-21 bit_score=104.0 identity=44.36 coverage=56.9377990430622)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=44 to=174 evalue=8.8e-29 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=44 to=174 evalue=1.2e-24)
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ACD15_52_16
uncultured bacterium, Bacteria
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Not on your lists |
12051..12929
|
putative deoxycytidylate deaminase
no description (db=Gene3D db_id=G3DSA:3.40.140.10 from=136 to=278 evalue=3.2e-29)
Cytidine deaminase-like (db=superfamily db_id=SSF53927 from=138 to=276 evalue=1.0e-24 interpro_id=IPR016193 interpro_description=Cytidine deaminase-like GO=Molecular Function: catalytic activity (GO:0003824))
DEOXYCYTIDYLATE DEAMINASE-RELATED (db=HMMPanther db_id=PTHR11086 from=129 to=256 evalue=6.5e-19 interpro_id=IPR015517 interpro_description=Cytidine deaminase)
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ACD15_52_17
uncultured bacterium, Bacteria
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Not on your lists |
comp(12996..13517)
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HIT-like (db=superfamily db_id=SSF54197 from=35 to=168 evalue=8.5e-08 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
Uncharacterized protein {ECO:0000313|EMBL:EKE11899.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_52_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(13624..14118)
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HIT-like (db=superfamily db_id=SSF54197 from=21 to=139 evalue=2.3e-10 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
Uncharacterized protein {ECO:0000313|EMBL:EKE11900.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_52_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(14142..15071)
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thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase/dCMP hydroxymethylase (db=superfamily db_id=SSF55831 from=8 to=309 evalue=6.5e-69 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
Thymidylat_synt (db=HMMPfam db_id=PF00303 from=17 to=307 evalue=1.5e-63 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
no description (db=Gene3D db_id=G3DSA:3.30.572.10 from=18 to=309 evalue=4.1e-61 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
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ACD15_52_20
uncultured bacterium, Bacteria
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Not on your lists |
15219..15692
|
Dihydrofolate reductase n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5R6D4_9FIRM (db=UNIREF evalue=8.0e-37 bit_score=155.0 identity=49.35 coverage=94.3037974683544)
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=1 to=157 evalue=3.1e-52)
DHFR_1 (db=HMMPfam db_id=PF00186 from=1 to=157 evalue=9.1e-52 interpro_id=IPR001796 interpro_description=Dihydrofolate reductase domain GO=Molecular Function: dihydrofolate reductase activity (GO:0004146), Biological Process: glycine biosynthetic process (GO:0006545), Biological Process: nucleotide biosynthetic process (GO:0009165))
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ACD15_52_21
uncultured bacterium, Bacteria
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Not on your lists |
15754..16179
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deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
seg (db=Seg db_id=seg from=131 to=139)
dut: dUTP diphosphatase (db=HMMTigr db_id=TIGR00576 from=2 to=140 evalue=1.3e-51 interpro_id=IPR008181 interpro_description=DeoxyUTP pyrophosphatase domain, subfamily 1, GO=Molecular Function: dUTP diphosphatase activity (GO:0004170), Biological Process: dUTP metabolic process (GO:0046080))
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (db=HMMPanther db_id=PTHR11241 from=5 to=141 evalue=1.3e-44)
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ACD15_52_22
uncultured bacterium, Bacteria
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Not on your lists |
16252..17721
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glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
Glutamyl-tRNA(Gln) amidotransferase, B subunit n=1 Tax=Thermincola sp. JR RepID=D5XD91_9FIRM (db=UNIREF evalue=2.0e-138 bit_score=496.0 identity=49.19 coverage=97.1428571428571)
GATB (db=PatternScan db_id=PS01234 from=142 to=156 evalue=0.0 interpro_id=IPR017958 interpro_description=Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO=Biological Process: translation (GO:0006412), Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
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ACD15_52_23
uncultured bacterium, Bacteria
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Not on your lists |
17747..18076
|
coiled-coil (db=Coil db_id=coil from=28 to=62 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE11905.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_52_24
uncultured bacterium, Bacteria
|
Not on your lists |
18740..19798
|
hypothetical protein
seg (db=Seg db_id=seg from=247 to=261)
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=27 to=77 evalue=1.9e-10 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=25 to=92 evalue=2.6e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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ACD15_52_25
uncultured bacterium, Bacteria
|
Not on your lists |
19859..21094
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=327 to=340)
Uncharacterized protein {ECO:0000313|EMBL:EKE11886.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
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ACD15_52_26
uncultured bacterium, Bacteria
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Not on your lists |
21142..23025
|
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH (db=UNIREF evalue=5.0e-135 bit_score=485.0 identity=56.35 coverage=65.6050955414013)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=439 to=465)
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ACD15_52_27
uncultured bacterium, Bacteria
|
Not on your lists |
23105..24172
|
seg (db=Seg db_id=seg from=5 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=315 to=337)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=140)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=100)
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ACD15_52_28
uncultured bacterium, Bacteria
|
Not on your lists |
24772..25473
|
dnaJ; chaperone Hsp40, co-chaperone with DnaK
seg (db=Seg db_id=seg from=114 to=126)
CHAPERONE PROTEIN DNAJ (db=HMMPanther db_id=PTHR11821:SF79 from=1 to=216 evalue=1.8e-72)
DNAJ/HSP40 (db=HMMPanther db_id=PTHR11821 from=1 to=216 evalue=1.8e-72 interpro_id=IPR015609 interpro_description=Molecular chaperone, heat shock protein, Hsp40, DnaJ)
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ACD15_52_29
uncultured bacterium, Bacteria
|
Not on your lists |
25642..26295
|
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ACD15_52_30
uncultured bacterium, Bacteria
|
Not on your lists |
comp(26366..27616)
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ATP-dependent RNA helicase RhlE
DEAD/DEAH box helicase-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I1F5_9BACT (db=UNIREF evalue=4.0e-91 bit_score=338.0 identity=44.42 coverage=93.2853717026379)
seg (db=Seg db_id=seg from=5 to=20)
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