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ACD15_63

Alias: ACD15_321.16087.16

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_63_1

Not on your lists

130..483
DNA (354bp) protein (118aa)
coiled-coil (db=Coil db_id=coil from=26 to=66 evalue=NA)
coiled-coil (db=Coil db_id=coil from=80 to=111 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=83 to=99)
ACD15_63_2

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comp(519..911)
DNA (393bp) protein (131aa)
N-(deoxy)ribosyltransferase-like (db=superfamily db_id=SSF52309 from=1 to=102 evalue=6.9e-09)
Nuc_deoxyrib_tr (db=HMMPfam db_id=PF05014 from=14 to=108 evalue=1.4e-08 interpro_id=IPR007710 interpro_description=Nucleoside 2-deoxyribosyltransferase GO=Cellular Component: nucleus (GO:0005634), Molecular Function: deoxyribonucleoside 5'-monophosphate N-glycosidase activity (GO:0070694))
Uncharacterized protein {ECO:0000313|EMBL:EKE11258.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_63_3

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comp(956..1480)
DNA (525bp) protein (175aa)
peptidase C39 bacteriocin processing
Peptidase_C39 (db=HMMPfam db_id=PF03412 from=10 to=143 evalue=3.8e-10 interpro_id=IPR005074 interpro_description=Peptidase C39, bacteriocin processing GO=Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233), Cellular Component: integral to membrane (GO:0016021))
PEPTIDASE_C39 (db=ProfileScan db_id=PS50990 from=11 to=149 evalue=13.001 interpro_id=IPR005074 interpro_description=Peptidase C39, bacteriocin processing GO=Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233), Cellular Component: integral to membrane (GO:0016021))
Uncharacterized protein {ECO:0000313|EMBL:EKE11259.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_63_4

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comp(1616..2869)
DNA (1254bp) protein (418aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=379 to=401)
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=127)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
ACD15_63_5

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comp(2890..3138)
DNA (249bp) protein (83aa)
2890..3138 - (rbs_motif=TAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11261.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_63_6

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comp(3177..4073)
DNA (897bp) protein (299aa)
protein-export membrane protein SecF
transmembrane_regions (db=TMHMM db_id=tmhmm from=267 to=289)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=202)
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=257)
ACD15_63_7

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comp(4095..5795)
DNA (1701bp) protein (567aa)
secD; preprotein translocase subunit D
Protein-export membrane protein secD, accessory membrane protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHR7_CLOAI (db=UNIREF evalue=3.0e-74 bit_score=283.0 identity=34.92 coverage=91.005291005291)
transmembrane_regions (db=TMHMM db_id=tmhmm from=495 to=514)
transmembrane_regions (db=TMHMM db_id=tmhmm from=442 to=464)
ACD15_63_8

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comp(5841..6314)
DNA (474bp) protein (158aa)
NUDIX hydrolase
Putative uncharacterized protein n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5ML33_9BACT (db=UNIREF evalue=6.0e-25 bit_score=116.0 identity=35.62 coverage=82.9113924050633)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=41 to=62 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=6 to=155 evalue=2.8e-21 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD15_63_9

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comp(6351..8981)
DNA (2631bp) protein (877aa)
Preprotein translocase, SecA subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT10_9FIRM (db=UNIREF evalue=0.0 bit_score=991.0 identity=57.34 coverage=94.8688711516534)
protein translocase subunit secA
protein translocase subunit secA
coiled-coil (db=Coil db_id=coil from=828 to=849 evalue=NA)
ACD15_63_10

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comp(9151..9531)
DNA (381bp) protein (127aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE11266.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_63_11

Not on your lists

comp(9699..10067)
DNA (369bp) protein (123aa)
coiled-coil (db=Coil db_id=coil from=85 to=106 evalue=NA)
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=8 to=122 evalue=8.4e-16 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
Ribosomal_S30AE (db=HMMPfam db_id=PF02482 from=9 to=100 evalue=2.0e-14 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
no description (db=Gene3D db_id=G3DSA:3.30.160.100 from=8 to=99 evalue=8.7e-10 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
ACD15_63_12

Not on your lists

comp(10154..11092)
DNA (939bp) protein (313aa)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Geobacter sp. M18 RepID=C6MV99_9DELT (db=UNIREF evalue=2.0e-72 bit_score=275.0 identity=44.05 coverage=98.0830670926518)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
murB: UDP-N-acetylenolpyruvoylglucosamine re (db=HMMTigr db_id=TIGR00179 from=10 to=311 evalue=7.1e-68 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Biological Process: oxidation reduction (GO:0055114))
UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE (db=HMMPanther db_id=PTHR21071 from=1 to=311 evalue=3.6e-51 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Biological Process: oxidation reduction (GO:0055114))
ACD15_63_13

Not on your lists

comp(11117..13834)
DNA (2718bp) protein (906aa)
cation-transporting P-type ATPase
cation-transporting P-type ATPase
Probable cation-transporting ATPase, P-type family n=1 Tax=uncultured archaeon RepID=D1JFE9_9ARCH (db=UNIREF evalue=0.0 bit_score=640.0 identity=41.48 coverage=98.4547461368653)
transmembrane_regions (db=TMHMM db_id=tmhmm from=266 to=288)
ACD15_63_14

Not on your lists

comp(13903..15279)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Desulfitobacterium hafniense RepID=MURC_DESHY (db=UNIREF evalue=2.0e-92 bit_score=343.0 identity=40.98 coverage=91.5032679738562)
seg (db=Seg db_id=seg from=5 to=23)
ACD15_63_15

Not on your lists

comp(15351..16124)
DNA (774bp) protein (258aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR21015 from=1 to=196 evalue=1.5e-70)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=257 evalue=1.7e-65)
no description (db=Gene3D db_id=G3DSA:3.40.50.2000 from=70 to=238 evalue=7.1e-45)
Displaying 15 items

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