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ACD15_66

Alias: ACD15_22459.6354.17

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_66_1

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comp(1..123)
DNA (123bp) protein (41aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE11399.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_66_2

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473..631
DNA (159bp) protein (53aa)
473..631 + (rbs_motif=TAATAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11398.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_66_3

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comp(908..1555)
DNA (648bp) protein (216aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=74 to=96)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
Uncharacterized protein {ECO:0000313|EMBL:EKE11396.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_66_4

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comp(1578..2210)
DNA (633bp) protein (211aa)
ECF subfamily RNA polymerase sigma factor
seg (db=Seg db_id=seg from=165 to=177)
SIGMA70_ECF (db=PatternScan db_id=PS01063 from=63 to=94 evalue=0.0 interpro_id=IPR000838 interpro_description=RNA polymerase sigma factor 70, ECF, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=36 to=200 evalue=6.2e-48 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD15_66_5

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3401..4033
DNA (633bp) protein (211aa)
seg (db=Seg db_id=seg from=181 to=194)
seg (db=Seg db_id=seg from=149 to=162)
seg (db=Seg db_id=seg from=112 to=126)
seg (db=Seg db_id=seg from=69 to=107)
ACD15_66_6

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4058..4594
DNA (537bp) protein (179aa)
Small heat shock protein
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 (db=UNIREF evalue=6.0e-19 bit_score=97.1 identity=44.09 coverage=68.7150837988827)
seg (db=Seg db_id=seg from=115 to=128)
seg (db=Seg db_id=seg from=37 to=41)
ACD15_66_7

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4781..6043
DNA (1263bp) protein (421aa)
VanW family protein
seg (db=Seg db_id=seg from=175 to=186)
VanW (db=HMMPfam db_id=PF04294 from=205 to=337 evalue=5.7e-41 interpro_id=IPR007391 interpro_description=VanW)
PG_binding_4 (db=HMMPfam db_id=PF12229 from=95 to=166 evalue=2.4e-11 interpro_id=IPR022029 interpro_description=Putative peptidoglycan binding domain)
Displaying 7 items

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