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ACD15_93

Alias: ACD15_48182.6560.6

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_93_1

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1..1344
DNA (1344bp) protein (448aa)
hypothetical protein (db=KEGG evalue=7.0e-22 bit_score=108.0 identity=25.72 coverage=92.8571428571429)
hypothetical protein alias=ACD15_48182.6560.6_1,ACD15_48182.6560.6G0001,ACD15_C00093G00001 id=9359 tax=ACD15 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE11013.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_93_2

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1351..1869
DNA (519bp) protein (173aa)
1351..1869 + (rbs_motif=TAA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE11014.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_93_3

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1937..2824
DNA (888bp) protein (296aa)
hypothetical protein
seg (db=Seg db_id=seg from=96 to=106)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=103 to=290 evalue=5.2e-43 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=108 to=282 evalue=4.7e-41 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD15_93_4

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3649..4305
DNA (657bp) protein (219aa)
hypothetical protein
HAD-like (db=superfamily db_id=SSF56784 from=3 to=216 evalue=1.6e-53)
2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 (db=HMMPanther db_id=PTHR18901 from=3 to=218 evalue=2.4e-44)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=4 to=216 evalue=2.0e-33)
ACD15_93_5

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4875..5603
DNA (729bp) protein (243aa)
ribosome-associated GTPase
seg (db=Seg db_id=seg from=223 to=240)
DUF258 (db=HMMPfam db_id=PF03193 from=50 to=202 evalue=1.0e-47 interpro_id=IPR004881 interpro_description=GTPase EngC GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=5 to=213 evalue=1.1e-46)
ACD15_93_6

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5618..6052
DNA (435bp) protein (145aa)
NUDIX hydrolase
NUDIX hydrolase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIM9_DESAA (db=UNIREF evalue=8.0e-38 bit_score=159.0 identity=53.44 coverage=89.6551724137931)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=38 to=59 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=1 to=132 evalue=1.1e-30 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD15_93_7

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6139..6594
DNA (456bp) protein (152aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KAP8_9GAMM (db=UNIREF evalue=5.0e-39 bit_score=162.0 identity=58.22 coverage=95.3947368421053)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=116)
Displaying 7 items

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