Alias: ACD15p_78905.13305.10
name | lists | location/seqs | annotations | notes |
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ACD15_101_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(2..205)
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2..205 - ( gc_cont=0.436)
Uncharacterized protein {ECO:0000313|EMBL:EKE10594.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_101_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(382..1074)
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LexA family transcriptional repressor (EC:3.4.21.88)
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=6 to=221 evalue=8.8e-24 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=83 to=218 evalue=9.9e-18 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=7 to=77 evalue=4.3e-16)
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ACD15_101_3
uncultured bacterium, Bacteria
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Not on your lists |
1311..1700
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(db=HMMPfam db_id=PF00072 from=16 to=113 evalue=1.5e-08 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=8 to=126 evalue=1.4e-06 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
Uncharacterized protein {ECO:0000313|EMBL:EKE10586.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_101_4
uncultured bacterium, Bacteria
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Not on your lists |
1712..2116
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DNA-binding response regulator
CheY-like (db=superfamily db_id=SSF52172 from=6 to=133 evalue=3.4e-25 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF00072 from=9 to=121 evalue=1.4e-21 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=8 to=134 evalue=7.3e-21)
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ACD15_101_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(2220..2636)
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PAS/PAC sensor hybrid histidine kinase
UPI00021287F3 related cluster n=1 Tax=unknown RepID=UPI00021287F3 (db=UNIREF evalue=8.0e-12 bit_score=73.2 identity=33.33 coverage=74.1007194244604)
CheY-like (db=superfamily db_id=SSF52172 from=20 to=120 evalue=3.5e-15 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=21 to=120 evalue=8.3e-13)
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ACD15_101_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2963..3544)
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2963..3544 - ( gc_cont=0.325)
Uncharacterized protein {ECO:0000313|EMBL:EKE10589.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_101_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(3581..3679)
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3581..3679 - ( gc_cont=0.303)
Uncharacterized protein {ECO:0000313|EMBL:EKE10590.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_101_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(3695..5590)
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Putative uncharacterized protein n=1 Tax=Cellulophaga algicola DSM 14237 RepID=E6XDB4_CELAD (db=UNIREF evalue=5.0e-22 bit_score=110.0 identity=24.69 coverage=84.8101265822785)
hypothetical protein (db=KEGG evalue=5.0e-13 bit_score=80.1 identity=23.79 coverage=84.0189873417722)
coiled-coil (db=Coil db_id=coil from=6 to=27 evalue=NA)
seg (db=Seg db_id=seg from=185 to=195)
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ACD15_101_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(5923..6678)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=132 to=154)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=11 to=29)
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ACD15_101_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(6956..7960)
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Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVL5_9EURY (db=UNIREF evalue=4.0e-15 bit_score=85.9 identity=32.83 coverage=56.1194029850746)
seg (db=Seg db_id=seg from=87 to=105)
seg (db=Seg db_id=seg from=110 to=125)
seg (db=Seg db_id=seg from=132 to=144)
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ACD15_101_11
uncultured bacterium, Bacteria
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Not on your lists |
8373..8954
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transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKE10580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD15_101_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(9144..9725)
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recR; recombinational DNA repair protein
Recombination protein recR n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NVX0_9BIFI (db=UNIREF evalue=3.0e-52 bit_score=207.0 identity=48.72 coverage=98.4536082474227)
RECR (db=PatternScan db_id=PS01300 from=56 to=77 evalue=0.0 interpro_id=IPR015967 interpro_description=Recombination protein RecR, conserved site GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
recR: recombination protein RecR (db=HMMTigr db_id=TIGR00615 from=1 to=193 evalue=9.5e-95 interpro_id=IPR000093 interpro_description=DNA recombination protein RecR GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
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ACD15_101_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(9743..11107)
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Replicative DNA helicase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSV0_9BACT (db=UNIREF evalue=1.0e-136 bit_score=490.0 identity=53.83 coverage=96.043956043956)
DNA helicase
DNA helicase
DnaB: replicative DNA helicase (db=HMMTigr db_id=TIGR00665 from=11 to=449 evalue=6.3e-244 interpro_id=IPR007692 interpro_description=DNA helicase, DnaB type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA helicase activity (GO:0003678), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260))
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ACD15_101_14
uncultured bacterium, Bacteria
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Not on your lists |
comp(11220..12191)
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tRNA-dihydrouridine synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJW0_9FIRM (db=UNIREF evalue=4.0e-56 bit_score=222.0 identity=39.14 coverage=92.2839506172839)
tRNA-U20-dihydrouridine synthase
UPF0034 (db=PatternScan db_id=PS01136 from=97 to=115 evalue=0.0 interpro_id=IPR018517 interpro_description=tRNA-dihydrouridine synthase, conserved site GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
tRNA-dihydrouridine synthase (db=HMMPIR db_id=PIRSF006621 from=4 to=323 evalue=1.7e-78 interpro_id=IPR001269 interpro_description=tRNA-dihydrouridine synthase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
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ACD15_101_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(12463..12723)
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seg (db=Seg db_id=seg from=64 to=86)
Uncharacterized protein {ECO:0000313|EMBL:EKE10584.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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