ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

ACD15_24_30

Organism: ACD15

near complete RP 50 / 55 MC: 14 BSCG 47 / 51 MC: 5 ASCG 0 / 38
Location: comp(28848..31871)

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 560.0
  • Bit_score: 401
  • Evalue 9.20e-109
seg (db=Seg db_id=seg from=894 to=906) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=309 to=320) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 3024
ATGATAAAAATAACCAAAAAAAATACAAGCGAGAAAGAAAATGAGAAAGAAATCATCACTCAAAAAGTTCTTTCCGCTATGCGTCATGCATCTGAGGAAGAAAGGACATCTGCCTTTGCCTCTGAAATCGGATTTCCCTATCTCGACACCAATCTTATTCCTATAAACAATGAAAACATCCGTCTTATAACCGAAGAAGATGCTAGAAAATACGGAGTGGCTATAATTCAAAAAATTAATCATAAAATAACAGTCATCGCCACCAATCCAAAAGACGATTCAACAGCTGAATATATAAAAAACTTGGAGAGCAATAATGGCTGGACCATAAAAATATTTGTTGTTTCCCATTATAATATCGGCAAGGCTTGGGAAAGATATAAGGAAATTCTGTTTGTTGATATTCTTTCCCAGCTTAGCGTAAATCTTACCGGCGAAGATTTGGCAAATTTTGATAGATATCTCAAGGATCTTATCGACCTCAAAGAAAGAATCAACGATCTTTCCACTACCCAAGTCATCAACATCATTATGGGAGGGTCGTATAAATTAGGAGCCAGCGATGTCCATATCGAACCTCAAGAAAAAGAATTTCGCTTGCGCTACCGTATTGATGGCGTCTTGCATGATATCGCCCTTCTTCCGCTCAGCTCTCTTCGTTCTATTGTTTCACGTATAAAAATGATGTCCGGAATGAAAATAAATGTCCGAGACATCGCACAGGACGGAATTTTTCAAGTAAATATTGAAAATAAATCTGTAGCTATTCGTGTTTCAGTCATTCCGGGAAAATTTGGTGAGAGCACCGTAATGCGTCTTCTTGATCCCTATTCAATCAATGTCAATATTGAAACCCTGGGCATCCAAGGCTTGGCATATGAAGAGATCCAAAGACAGATTGCAGCTCCAAATGGAATGATTCTCACTACCGGACCGACAGGATCAGGAAAAACCACGACGCTCTATTCCATTATTCATAAGCTCAATAAGCCGGAAAATAAGATCATTACTATTGAAGATCCGATTGAATATAGCATTGCTGGAATTTCTCAAACTCAAATTGAAAAATCTCGAGGCTACACTTTTGCTACGGGACTGCGAGCTATTGTCAGACAAGATCCTGACATTATTCTCGTAGGAGAAATTCGTGATGAAGAAACAGCCGACATTGCAGTCAACTCAGCTCTGACAGGCCATCTCGTGCTTTCTACCATTCATACCAACAGTGCCATTGGAACCATCCCTCGTCTTATTGAAATGGGCATCAAACCGACTCTTATCATACCCTCCGTCAATGCCATTATCGCTCAACGATTGGTGCGAAAACTCTGTTCTTGCAAAGAAGCCTATGCTCCAGCCAAAGAATCCATAGAGTCTCTTAAAAAACTTCTTTCTATCATATCCCCTAAATCAAAAGTTGAAATACCCAAAGAAATCTCCACTCTCTATAGGCCTAAGGGATGTCCTAAATGCAATAATCTAGGTTATAAGGGCAGAATCGGTATATTTGAAATATTGCTTATCAATCAAGAATTGGAAAAGCTTATTCTTGATCTGGCAGGAGAGACAGAGCTGACCGTAGCCGCTCTGGAATCAGGCATGATAACCATGCTTCAAGATGGCATCTTGAAAGCTCTTCAAGGCAGCACCTCTATCGATGAAGTAAAAAGAGTGACTGGAGAAGGTGATTTTCTTGAAACTATCTATGAAAAATTAATGGATCAGTCTCTTGGACGTGGAATAACAGTGACTCCGGCTGATTTTCTAAAAGCTCAGGAAAATATAAAAGATTTCAAGAAATTGCAAGAAGTTATTTCCACTTCCCAGACCAATGATATACCAAAAATTATTTTTGCTGCCGCTTCTCTATTGAGAGTGGGTGATATCCATGTTGAGCCTGGAGCAGAAAATATCAAGATCAGATTCAGAATAGATGGAATCTTGCAAACGGTAGTAACTTTCCCTCTCAATGAGTATCCTAACTTTTTAGGCAAGATAAAAATACTGAGCGGAGTTAAAACTCAGACCAGGGAAGGCGTGATTGATAGTCGCTTTGTTATAAAATTTGATCCGGAAATAGAAAATGTGGTGGAAAAATCGGTCGATGTGCGTGTTTCTATTATTCTTGGCGGCTATGGAGAAACGGTAGTAATGAGACTTCTTAGCAAGGCTTCCCAGGAGCTAGATATGGATAAATTGGGAATTCGCGAGCAAAATAAGAAAAAAATCCTTCATGAAATTTCCAAAGCTAACGGAGTCTTTCTTAACACCGGACCAACGGGATCAGGAAAAACCACCACTCTATACAGCATTCTTAATATTCTTAATAATCCCGAAATTAAAATTATTACTGTTGAAGATCCGATTGAATATCAAATCGAGGGAATTTTGCAAACGCCTACTAATGACAAAGAAGGCTACACATTTTCTACCGCTCTTCGAGCCCTCCTTCGCCAAAATCCGGATATTATGATGATTGGAGAAATCCGCGATGATGAAACCGCGCAAATTGCCGTCCAAGCCGCTCTTACAGGACATCTCGTGCTCTCCACAATCCACACCAACACAGCAGCCGGAGCCGCCCAAAGAATGATAAACATGGGCGTATCCCCTTCTGATATAGCTTCTTCGGTCAATGCTTTTATGGCTCAGCGCCTTGTACGAAAACTTTGCTCCTGCAAAGAAAAATTTACTCCAACAGAAGAAGAAAAAGAAAAAATAAGCAATGTTCTAAAAACTATTTCACCTGCCACCAATGTAGAAATTCCTTCAGATTGGCAAACCTATAAGCCTGTGGGTTGCGAAAAATGCAGCCACATGGGATATAAGGGCCGCACCACAGTCAGCGAAGTCTTTATAATTGACAGAGATATCCAAGCTCTCGTTACTCAAGGCGCCATTACTCCGGAACTTGAAGAAAAAGCCATTGAAAATGGAATGCTGACTATGGTTCAAGATGGAGTTCTAAAGGTAATTGAAGGAGAAACCACCCTAAGCGAAATAGAAAGGGTAACCGACTTGTAA
PROTEIN sequence
Length: 1008
MIKITKKNTSEKENEKEIITQKVLSAMRHASEEERTSAFASEIGFPYLDTNLIPINNENIRLITEEDARKYGVAIIQKINHKITVIATNPKDDSTAEYIKNLESNNGWTIKIFVVSHYNIGKAWERYKEILFVDILSQLSVNLTGEDLANFDRYLKDLIDLKERINDLSTTQVINIIMGGSYKLGASDVHIEPQEKEFRLRYRIDGVLHDIALLPLSSLRSIVSRIKMMSGMKINVRDIAQDGIFQVNIENKSVAIRVSVIPGKFGESTVMRLLDPYSINVNIETLGIQGLAYEEIQRQIAAPNGMILTTGPTGSGKTTTLYSIIHKLNKPENKIITIEDPIEYSIAGISQTQIEKSRGYTFATGLRAIVRQDPDIILVGEIRDEETADIAVNSALTGHLVLSTIHTNSAIGTIPRLIEMGIKPTLIIPSVNAIIAQRLVRKLCSCKEAYAPAKESIESLKKLLSIISPKSKVEIPKEISTLYRPKGCPKCNNLGYKGRIGIFEILLINQELEKLILDLAGETELTVAALESGMITMLQDGILKALQGSTSIDEVKRVTGEGDFLETIYEKLMDQSLGRGITVTPADFLKAQENIKDFKKLQEVISTSQTNDIPKIIFAAASLLRVGDIHVEPGAENIKIRFRIDGILQTVVTFPLNEYPNFLGKIKILSGVKTQTREGVIDSRFVIKFDPEIENVVEKSVDVRVSIILGGYGETVVMRLLSKASQELDMDKLGIREQNKKKILHEISKANGVFLNTGPTGSGKTTTLYSILNILNNPEIKIITVEDPIEYQIEGILQTPTNDKEGYTFSTALRALLRQNPDIMMIGEIRDDETAQIAVQAALTGHLVLSTIHTNTAAGAAQRMINMGVSPSDIASSVNAFMAQRLVRKLCSCKEKFTPTEEEKEKISNVLKTISPATNVEIPSDWQTYKPVGCEKCSHMGYKGRTTVSEVFIIDRDIQALVTQGAITPELEEKAIENGMLTMVQDGVLKVIEGETTLSEIERVTDL*