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ar4r2_scaffold_1063

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1063_1
unknown

Not on your lists

1..372
DNA (372bp) protein (124aa)

This feature has no annotations

ar4r2_scaffold_1063_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

391..1443
DNA (1053bp) protein (351aa)
rlmN2; ribosomal RNA large subunit methyltransferase N 2 (EC:2.1.1.- 2.1.1.192)
rlmN2; ribosomal RNA large subunit methyltransferase N 2 (EC:2.1.1.-); K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] id=982165 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
ar4r2_scaffold_1063_3
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(1604..2782)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6N4_9BACT
oxaA; inner membrane protein OxaA
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
ar4r2_scaffold_1063_4
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2901..3881)
DNA (981bp) protein (327aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1422 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus (Bacillus stearothermophilus).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Geobacillus stearothermophilus RepID=Q7BG47_GEOSE rbh
dTDP-glucose 4,6-dehydratase rbh
ar4r2_scaffold_1063_5
RLO_PER_ii_53_10, PER-ii, Bacteria

Not on your lists

comp(3912..7250)
DNA (3339bp) protein (1113aa)
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=SPOT_AQUAE
spoT; (p)ppGpp 3-pyrophosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_PER_ii_53_10_curated
ar4r2_scaffold_1063_6
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(7278..8171)
DNA (894bp) protein (298aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase related protein id=2949316 bin=GWC1_CPR2_39_9 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
D-alanyl-D-alanine carboxypeptidase related protein {ECO:0000313|EMBL:KKQ94816.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
ar4r2_scaffold_1063_7
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

comp(8168..8941)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ACR8_9BACT
Tax=CG_PER_02
ar4r2_scaffold_1063_8
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(8938..10227)
DNA (1290bp) protein (430aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase id=2604228 bin=GWC1_CPR2_39_9 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good rbh
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
Tax=CG_CPR16-01
ar4r2_scaffold_1063_9
unknown

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comp(10254..10862)
DNA (609bp) protein (203aa)

This feature has no annotations

ar4r2_scaffold_1063_10
unknown

Not on your lists

comp(10933..11631)
DNA (699bp) protein (233aa)

This feature has no annotations

ar4r2_scaffold_1063_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11776..12234)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI0003745DF4
50S ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
ar4r2_scaffold_1063_12
CG_PER_03, Peregrinibacteria, Bacteria

Not on your lists

comp(12231..14330)
DNA (2100bp) protein (700aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=5094684 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
putative ABC transporter substrate binding protein
Tax=CG_PER_03
ar4r2_scaffold_1063_13
R_RIF_OD1_02_44_13, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(14343..14561)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_02_44_13_curated
ar4r2_scaffold_1063_14
unknown

Not on your lists

14728..14994
DNA (267bp) protein (89aa)

This feature has no annotations

ar4r2_scaffold_1063_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14989..16746)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSC8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ34271.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_1063_16
unknown

Not on your lists

comp(16731..17195)
DNA (465bp) protein (155aa)

This feature has no annotations

ar4r2_scaffold_1063_17
unknown

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comp(17408..17863)
DNA (456bp) protein (152aa)

This feature has no annotations

ar4r2_scaffold_1063_18
unknown

Not on your lists

18079..18591
DNA (513bp) protein (171aa)

This feature has no annotations

ar4r2_scaffold_1063_19
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(18642..19883)
DNA (1242bp) protein (414aa)
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3) rbh
Glutamate dehydrogenase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3I2_THEOJ rbh
Glutamate dehydrogenase {ECO:0000313|EMBL:KKS70416.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
ar4r2_scaffold_1063_20
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20018..20599
DNA (582bp) protein (194aa)
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit id=4809189 bin=GWC2_Ignavibacteria_56_12 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
ar4r2_scaffold_1063_21
Leptotrichia sp. oral taxon 225, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists


20754..22481
DNA (1728bp) protein (576aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1321774 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 225 str. F0581.;"
Arginine--tRNA ligase n=1 Tax=Leptotrichia sp. oral taxon 225 str. F0581 RepID=U2THK9_9FUSO rbh
arginyl-tRNA synthetase rbh
ar4r2_scaffold_1063_22
unknown

Not on your lists

22514..23380
DNA (867bp) protein (289aa)

This feature has no annotations

ar4r2_scaffold_1063_23
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

23396..23632
DNA (237bp) protein (79aa)
transmembrane_regions id=5802307 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
ar4r2_scaffold_1063_24
unknown

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23619..23963
DNA (345bp) protein (115aa)

This feature has no annotations

ar4r2_scaffold_1063_25
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(23971..24183)
DNA (213bp) protein (71aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2D6X0_9BACT
YcfA-like protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
ar4r2_scaffold_1063_26
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(24125..24397)
DNA (273bp) protein (91aa)
hypothetical protein id=30840 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:KKT74617.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
hypothetical protein
ar4r2_scaffold_1063_27
GWA1_OD1_44_29, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

24477..26153
DNA (1677bp) protein (559aa)
Multicopper oxidase family protein {ECO:0000313|EMBL:KKT61984.1}; TaxID=1618646 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_29.;"
hypothetical protein id=5801813 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
sufI; Multicopper oxidase rbh
ar4r2_scaffold_1063_28
GWD1_OD1_35_49, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

26220..26477
DNA (258bp) protein (86aa)
Heavy metal-associated domain, HMA id=5803174 bin=OD1_GWC2_34_28 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP79245.1}; TaxID=1618631 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWD1_35_49.;"
ar4r2_scaffold_1063_29
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

comp(26484..27410)
DNA (927bp) protein (309aa)
Methicillin resistance protein id=3062575 bin=GWC1_CPR2_39_9 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
femA; protein FemA
Tax=CG_CPR17-01
ar4r2_scaffold_1063_30
unknown

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comp(27612..27965)
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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