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ar4r2_scaffold_1470

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1470_1
unknown

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2..1306
DNA (1305bp) protein (435aa)

This feature has no annotations

ar4r2_scaffold_1470_2

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2149..2802
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G886_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26319.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1470_3

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2818..3399
DNA (582bp) protein (194aa)
transmembrane_regions 7..29 id=68963 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66261.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1470_4

Not on your lists

3405..4184
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5F0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26321.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1470_5
GWC2_WWE3_44_9, WWE3, Bacteria

Not on your lists

4246..5031
DNA (786bp) protein (262aa)
cell division protein Fic n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F157
Fic {ECO:0000313|EMBL:KKT83035.1}; TaxID=1619125 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_44_9.;"
Fic/DOC family protein
ar4r2_scaffold_1470_6
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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5041..6420
DNA (1380bp) protein (460aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
Putative UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGL62221.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AGL62221.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Putative UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYD9_9BACT
Amino sugar on path to UDP-N-acetyl-D-mannosaminouronate Jill Banfield (11/8/16)
ar4r2_scaffold_1470_7
ACD78, Gracilibacteria, Bacteria

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comp(6453..6866)
DNA (414bp) protein (138aa)
putative secreted protein id=124790 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD78
ar4r2_scaffold_1470_8
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

comp(6892..7791)
DNA (900bp) protein (300aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=5098076 bin=PER_GWF2_43_18 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
ilvE; Branched-chain-amino-acid aminotransferase (EC:2.6.1.42)
Tax=CG_PER_02
Many aa pathways Jill Banfield (11/8/16)
ar4r2_scaffold_1470_9
unknown

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comp(7819..8445)
DNA (627bp) protein (209aa)

This feature has no annotations

ar4r2_scaffold_1470_10

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comp(8476..9285)
DNA (810bp) protein (270aa)
Prephenate dehydratase {ECO:0000313|EMBL:EKE26366.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EKE26366.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5K3_9BACT rbh
Phe, Try, Trp biosynthesis Jill Banfield (11/8/16)
ar4r2_scaffold_1470_11
ACD78, Gracilibacteria, Bacteria

Not on your lists

9574..10806
DNA (1233bp) protein (411aa)
Cell division protein ftsA n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJH9_9BACT rbh
ftsA; cell division protein FtsA
Tax=ACD78
ar4r2_scaffold_1470_12
CG_GN02-01, Gracilibacteria, Bacteria

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10990..12249
DNA (1260bp) protein (420aa)
bcl:ABC2353 ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ id=124823 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cell division protein FtsZ rbh
Tax=CG_GN02-01
ar4r2_scaffold_1470_13
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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12263..12916
DNA (654bp) protein (218aa)
hypothetical protein id=5090473 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKP37603.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
ar4r2_scaffold_1470_14
unknown

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12930..13442
DNA (513bp) protein (171aa)

This feature has no annotations

ar4r2_scaffold_1470_15

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13449..13700
DNA (252bp) protein (84aa)
Putative membrane protein insertion efficiency factor n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YWM4_9BACT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1470_16
CG_OP9-01, Atribacteria, Bacteria

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comp(13722..14627)
DNA (906bp) protein (302aa)
Cysteine synthase B n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A067_PELCD
cysM; cysteine synthase B
Tax=CG_OP9-01
ar4r2_scaffold_1470_17
unknown

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comp(14644..14994)
DNA (351bp) protein (117aa)

This feature has no annotations

ar4r2_scaffold_1470_18
unknown

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comp(15113..15262)
DNA (150bp) protein (50aa)

This feature has no annotations

ar4r2_scaffold_1470_19
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

15369..15908
DNA (540bp) protein (180aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2FEW2_9BACT
Leucyl-tRNA synthetase {ECO:0000313|EMBL:KKR04596.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
ar4r2_scaffold_1470_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

15930..16568
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037EAD82
beta-phosphoglucomutase
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
EC 5.4.2.6 starch/sucrose pathway, glucose transformation Jill Banfield (11/8/16)
ar4r2_scaffold_1470_21
R_OD1_40_30, Parcubacteria, Bacteria

Not on your lists

16583..17194
DNA (612bp) protein (204aa)
arylesterase (EC:3.1.1.2)
gdsl-family lipolytic enzyme id=3079082 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RIFCSPHIGHO2_01_FULL_OD1_40_30_curated
phenyl acetate + H2O = a phenol + acetate. 4-hydroxyphenyl acetate to hydroquinone (?) Jill Banfield (11/8/16)
ar4r2_scaffold_1470_22
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

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17208..17732
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F9C9_9BACT
cyclase
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
ar4r2_scaffold_1470_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17743..18837
DNA (1095bp) protein (365aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Dorea sp. 5-2 RepID=R9NCV0_9FIRM
early in Phe, Tyr, Trp pathway Jill Banfield (11/8/16)
ar4r2_scaffold_1470_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18844..19320
DNA (477bp) protein (159aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6E1_9CLOT
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:EHJ00857.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
YbaK/prolyl-tRNA synthetase associated region
ar4r2_scaffold_1470_25

Not on your lists

19331..20356
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AYH7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66802.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1470_26

Not on your lists

20437..21444
DNA (1008bp) protein (336aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GZQ1_9BACT rbh
ar4r2_scaffold_1470_trna_1
unknown

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comp(21570..21642)
DNA (73bp)
transferRNA His
ar4r2_scaffold_1470_27
unknown

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21958..22227
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 28 items

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