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ar4r2_scaffold_540

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_540_1
GWA1_OD1_49_11_partial, Parcubacteria, Bacteria

Not on your lists

381..641
DNA (261bp) protein (87aa)
Transposase IS200-family protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LV57_HIPMA
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:KKW02507.1}; TaxID=1618796 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_11.;"
ar4r2_scaffold_540_2
RIFOXYB1_FULL_OP11_Gottesmanbacteria_47_11_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

711..1091
DNA (381bp) protein (127aa)
hypothetical protein
seg 112..125 id=983367 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFOXYB1_FULL_OP11_Gottesmanbacteria_47_11_curated
ar4r2_scaffold_540_3
RBG_16_OP11_43_9_curated, Microgenomates, Bacteria

Not on your lists

comp(1407..1628)
DNA (222bp) protein (74aa)
GIY-YIG 1..65 id=132668 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Tax=RBG_16_OP11_43_9_curated
ar4r2_scaffold_540_trna_1
unknown

Not on your lists

comp(1705..1777)
DNA (73bp)
transferRNA Lys
ar4r2_scaffold_540_4

Not on your lists


comp(1841..2029)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIQ8_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_540_5
ACD80, SR1, Bacteria

Not on your lists


comp(2072..2710)
DNA (639bp) protein (213aa)
50S ribosomal protein L25 n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTC0_9BACT id=132676 bin=ACD80 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD80 organism_group=SR1 rbh
hypothetical protein
Tax=ACD80
ar4r2_scaffold_540_6
ACD80, SR1, Bacteria

Not on your lists


comp(2744..3181)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI000374503A
hypothetical protein
Tax=ACD80
ar4r2_scaffold_540_7
ACD80, SR1, Bacteria

Not on your lists

comp(3210..3353)
DNA (144bp) protein (48aa)
seg 35..47 id=132665 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
hypothetical protein
Tax=ACD80
ar4r2_scaffold_540_8
ACD80, SR1, Bacteria

Not on your lists

comp(3385..3636)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037BEFDF
hypothetical protein
Tax=ACD80
ar4r2_scaffold_540_9

Not on your lists


comp(3706..4197)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI000378EE1B
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ar4r2_scaffold_540_10
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4237..4662)
DNA (426bp) protein (142aa)
rpsL; 30S ribosomal protein S12
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=983512 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
ar4r2_scaffold_540_11
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5071..7134)
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037254A5 rbh
PDK repeat-containing protein
Tax=GWF2_Bacteroidetes_38_335_curated
ar4r2_scaffold_540_12
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7184..8641)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037FC8BB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ97026.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
ar4r2_scaffold_540_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8711..9493)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI0003627D6A
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACU04797.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
ar4r2_scaffold_540_14
ACD80, SR1, Bacteria

Not on your lists

comp(10144..12468)
DNA (2325bp) protein (775aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XHZ4_9BACT
hypothetical protein
Tax=ACD80
ar4r2_scaffold_540_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(12750..14036)
DNA (1287bp) protein (429aa)
b-glycosidase (EC:3.2.1.-)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00037254A5
Tax=BJP_IG2103_Bacteroidetes_41_9
ar4r2_scaffold_540_16
unknown

Not on your lists

comp(14221..17958)
DNA (3738bp) protein (1246aa)
hypothetical protein
transmembrane_regions 5..24 id=982189 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
ar4r2_scaffold_540_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18053..20743)
DNA (2691bp) protein (897aa)
hypothetical protein
transmembrane_regions 7..29 id=982190 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Conserved repeat domain protein {ECO:0000313|EMBL:ACU63175.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
ar4r2_scaffold_540_18
unknown

Not on your lists

comp(20791..21849)
DNA (1059bp) protein (353aa)

This feature has no annotations

ar4r2_scaffold_540_19
ACD80, SR1, Bacteria

Not on your lists

comp(21908..26980)
DNA (5073bp) protein (1691aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJJ3_9BACT rbh
Tax=ACD80
ar4r2_scaffold_540_20
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27807..29138
DNA (1332bp) protein (444aa)
Peptide ABC transporter, periplasmic peptide-binding protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJW9_9BACT id=983308 bin=RAAC1_SR1 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC1_SR1 organism_group=SR1 rbh
Peptide ABC transporter, periplasmic peptide-binding protein
Peptide ABC transporter, periplasmic peptide-binding protein {ECO:0000313|EMBL:EAY29422.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
ar4r2_scaffold_540_21

Not on your lists

29148..30161
DNA (1014bp) protein (338aa)
phage recombination protein Bet
phage recombination protein Bet id=983306 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL71233.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ar4r2_scaffold_540_22
GWB1_OP11_Woesebacteria_43_5_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

30264..31289
DNA (1026bp) protein (342aa)
hypothetical protein
hypothetical protein; K07465 putative RecB family exonuclease id=983305 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Tax=GWB1_OP11_Woesebacteria_43_5_curated
ar4r2_scaffold_540_23
unknown

Not on your lists

31684..31860
DNA (177bp) protein (59aa)
hypothetical protein
hypothetical protein id=983303 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_540_24
unknown

Not on your lists

31864..32154
DNA (291bp) protein (97aa)

This feature has no annotations

ar4r2_scaffold_540_25
unknown

Not on your lists

32277..32486
DNA (210bp) protein (70aa)
hypothetical protein
coiled-coil 46..67 id=983301 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_540_26
unknown

Not on your lists

32514..32816
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 27 items

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