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ar4r2_scaffold_752

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_752_1
GWA1_OD1_49_11_partial, Parcubacteria, Bacteria

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235..495
DNA (261bp) protein (87aa)
Transposase IS200-family protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LV57_HIPMA
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:KKW02507.1}; TaxID=1618796 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_11.;"
ar4r2_scaffold_752_2
unknown

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572..1210
DNA (639bp) protein (213aa)
hypothetical protein
hypothetical protein id=982678 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_752_3

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1297..2610
DNA (1314bp) protein (438aa)
Dockerin type 1 id=132394 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Dockerin type 1 {ECO:0000313|EMBL:EKD24544.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_752_4
R_RIF_OD1_10_39_19, RIF-OD1-1, Parcubacteria, Bacteria

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comp(2646..3125)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F9C5C
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_19_curated
ar4r2_scaffold_752_5

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comp(3239..4357)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XVR8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24548.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
MoxR-like ATPase rbh
ar4r2_scaffold_752_6

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4817..5701
DNA (885bp) protein (295aa)
hypothetical protein id=132398 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24549.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
mechanosensitive ion channel MscS
ar4r2_scaffold_752_7

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6205..7056
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XH01_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24551.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Prolipoprotein diacylglyceryl transferase
ar4r2_scaffold_752_8
unknown

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7117..7602
DNA (486bp) protein (162aa)

This feature has no annotations

ar4r2_scaffold_752_9

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comp(7765..8535)
DNA (771bp) protein (257aa)
hypothetical protein; K09807 hypothetical protein id=132424 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25119.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_752_10

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8670..10343
DNA (1674bp) protein (558aa)
cpf:CPF_1255 gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=132445 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25120.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_752_11
unknown

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10410..11729
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000366414C
ar4r2_scaffold_752_12

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comp(11781..12356)
DNA (576bp) protein (192aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIT9_9BACT rbh
hypothetical protein
ar4r2_scaffold_752_13

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12677..14176
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XXL5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25098.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_752_14

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14211..15041
DNA (831bp) protein (277aa)
seg 2..14 id=132425 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25099.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_752_15

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15242..16198
DNA (957bp) protein (319aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tRNA dimethylallyltransferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1X4P4_9BACT rbh
hypothetical protein
ar4r2_scaffold_752_16

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comp(16326..18074)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIZ6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25162.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
poly a polymerase family protein
ar4r2_scaffold_752_17
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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18597..20414
DNA (1818bp) protein (606aa)
Aspartyl-tRNA(Asn) amidotransferase subunit B {ECO:0000313|EMBL:GAL63816.1}; EC=6.1.1.12 {ECO:0000313|EMBL:GAL63816.1};; EC=6.1.1.23 {ECO:0000313|EMBL:GAL63816.1};; EC=6.3.5.6 {ECO:0000313|EMBL:GAL63816.1};; EC=6.3.5.7 {ECO:0000313|EMBL:GAL63816.1};; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
UPI0003CFA570 related cluster n=1 Tax=unknown RepID=UPI0003CFA570 rbh
hypothetical protein
ar4r2_scaffold_752_18
unknown

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comp(20476..21009)
DNA (534bp) protein (178aa)

This feature has no annotations

ar4r2_scaffold_752_19
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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21610..22260
DNA (651bp) protein (217aa)
Peptide ABC transporter, periplasmic peptide-binding protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJW9_9BACT id=983308 bin=RAAC1_SR1 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC1_SR1 organism_group=SR1
Peptide ABC transporter, periplasmic peptide-binding protein
Peptide ABC transporter, periplasmic peptide-binding protein {ECO:0000313|EMBL:EAY29422.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
ar4r2_scaffold_752_20
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22404..22862
DNA (459bp) protein (153aa)
Peptide ABC transporter, periplasmic peptide-binding protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJW9_9BACT id=983308 bin=RAAC1_SR1 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC1_SR1 organism_group=SR1
Peptide ABC transporter, periplasmic peptide-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EAY29421.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
ar4r2_scaffold_752_21

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22878..23885
DNA (1008bp) protein (336aa)
phage recombination protein Bet
phage recombination protein Bet id=983306 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:KKL71233.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ar4r2_scaffold_752_22
GWB1_OP11_Woesebacteria_43_5_curated, Woesebacteria, Microgenomates, Bacteria

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23987..25012
DNA (1026bp) protein (342aa)
hypothetical protein
hypothetical protein; K07465 putative RecB family exonuclease id=983305 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=GWB1_OP11_Woesebacteria_43_5_curated
ar4r2_scaffold_752_23
unknown

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25422..25598
DNA (177bp) protein (59aa)
hypothetical protein
hypothetical protein id=983303 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_752_24
unknown

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25602..25892
DNA (291bp) protein (97aa)

This feature has no annotations

ar4r2_scaffold_752_25
unknown

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26017..26226
DNA (210bp) protein (70aa)
hypothetical protein
coiled-coil 46..67 id=983301 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_752_26
unknown

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26254..26463
DNA (210bp) protein (70aa)
hypothetical protein
coiled-coil 46..67 id=983301 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_752_27
unknown

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26491..26793
DNA (303bp) protein (101aa)

This feature has no annotations

ar4r2_scaffold_752_28
unknown

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26820..26969
DNA (150bp) protein (50aa)
hypothetical protein
seg 82..106 id=983300 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Displaying 28 items

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