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ACD65_18

Alias: ACD65_66659.16690.9

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_18_1
unknown

Not on your lists

comp(2..67)
DNA (66bp) protein (22aa)
2..67 - (rbs_motif=TAA rbs_spacer=7bp)
ACD65_18_2

Not on your lists

493..1071
DNA (579bp) protein (193aa)
493..1071 + (rbs_motif=TAA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47689.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_18_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(1092..2045)
DNA (954bp) protein (318aa)
seg (db=Seg db_id=seg from=111 to=126)
seg 111..126 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD65_18_4

Not on your lists

comp(2102..3154)
DNA (1053bp) protein (351aa)
glycosyl transferase, family 4, conserved region
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=193)
ACD65_18_5

Not on your lists

comp(3164..3466)
DNA (303bp) protein (101aa)
Plasmid stabilization system n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NRX5_9DELT (db=UNIREF evalue=1.0e-15 bit_score=85.5 identity=42.71 coverage=91.0891089108911)
plasmid stabilization system protein
RelE-like (db=superfamily db_id=SSF143011 from=1 to=82 evalue=6.7e-20)
Plasmid_stabil (db=HMMPfam db_id=PF05016 from=4 to=81 evalue=1.8e-08 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
ACD65_18_6

Not on your lists

comp(3475..3756)
DNA (282bp) protein (94aa)
seg (db=Seg db_id=seg from=20 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKD47688.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_18_7

Not on your lists

comp(4186..4422)
DNA (237bp) protein (79aa)
4186..4422 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47685.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_18_8

Not on your lists

comp(4684..5268)
DNA (585bp) protein (195aa)
truB; tRNA pseudouridine synthase B
seg (db=Seg db_id=seg from=88 to=101)
TRNA-PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR13767 from=1 to=156 evalue=8.0e-33)
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=2 to=151 evalue=2.4e-27 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD65_18_9

Not on your lists

comp(5749..7059)
DNA (1311bp) protein (437aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase
seg (db=Seg db_id=seg from=238 to=252)
FOLYLPOLYGLU_SYNT_1 (db=PatternScan db_id=PS01011 from=41 to=64 evalue=0.0 interpro_id=IPR018109 interpro_description=Folylpolyglutamate synthetase, conserved site GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE (db=HMMPanther db_id=PTHR23135:SF4 from=43 to=429 evalue=1.1e-114)
ACD65_18_10

Not on your lists

comp(7093..7275)
DNA (183bp) protein (61aa)
7093..7275 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47682.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_18_11

Not on your lists

comp(7316..8878)
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MW71_9BACT (db=UNIREF evalue=5.0e-16 bit_score=89.7 identity=42.86 coverage=20.1535508637236)
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
seg (db=Seg db_id=seg from=225 to=237)
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=124)
ACD65_18_12
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8978..9679)
DNA (702bp) protein (234aa)
triosephosphate isomerase
seg (db=Seg db_id=seg from=166 to=179)
seg (db=Seg db_id=seg from=181 to=196)
seg (db=Seg db_id=seg from=19 to=32)
ACD65_18_13

Not on your lists

9780..14822
DNA (5043bp) protein (1681aa)
seg (db=Seg db_id=seg from=1661 to=1678)
seg (db=Seg db_id=seg from=1016 to=1028)
seg (db=Seg db_id=seg from=837 to=846)
seg (db=Seg db_id=seg from=187 to=201)
ACD65_18_14

Not on your lists

14848..16728
DNA (1881bp) protein (627aa)
seg (db=Seg db_id=seg from=615 to=627)
seg (db=Seg db_id=seg from=465 to=477)
seg (db=Seg db_id=seg from=358 to=372)
seg (db=Seg db_id=seg from=247 to=262)
Displaying 14 items

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