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ACD65_19

Alias: ACD65_8844.8974.9

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_19_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(3..374)
DNA (372bp) protein (124aa)
3..374 - (rbs_motif=CCCCCC rbs_spacer=15bp)
Rossmann fold nucleotide-binding protein; K06966 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD65_19_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(503..3754)
DNA (3252bp) protein (1084aa)
transcription-repair coupling factor
transcription-repair coupling factor
Transcription-repair coupling factor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRU9_9FIRM (db=UNIREF evalue=0.0 bit_score=641.0 identity=40.64 coverage=80.6273062730627)
seg (db=Seg db_id=seg from=245 to=257)
ACD65_19_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(3823..4926)
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
seg (db=Seg db_id=seg from=9 to=20)
no description (db=HMMSmart db_id=SM00480 from=17 to=363 evalue=1.5e-93 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=367 evalue=1.0e-82 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD65_19_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(5258..6160)
DNA (903bp) protein (301aa)
RNA-metabolising metallo-beta-lactamase
UPF0036 (db=PatternScan db_id=PS01292 from=106 to=134 evalue=0.0 interpro_id=IPR001587 interpro_description=Ribonuclease J, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Molecular Function: metal ion binding (GO:0046872))
RMMBL (db=HMMPfam db_id=PF07521 from=101 to=134 evalue=7.8e-09 interpro_id=IPR011108 interpro_description=RNA-metabolising metallo-beta-lactamase)
hypothetical protein; K12574 ribonuclease J [EC:3.1.-.-] alias=ACD65_8844.8974.9G0004,ACD65_8844.8974.9_4,ACD65_C00019G00004 id=97851 tax=ACD65 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=PER organism_desc=PER
ACD65_19_5

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6330..6596
DNA (267bp) protein (89aa)
seg (db=Seg db_id=seg from=41 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
Uncharacterized protein {ECO:0000313|EMBL:EKD47612.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_19_6

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comp(7517..8296)
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=3 to=22)
Uncharacterized protein {ECO:0000313|EMBL:EKD47613.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_19_7
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(8436..9011)
DNA (576bp) protein (192aa)
8436..9011 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
Displaying 7 items

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