ggKbase home page

ACD65_25

Alias: ACD65_487745.7039.5

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_25_1
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
cell division protein FtsK/SpoIIIE
seg (db=Seg db_id=seg from=14 to=39)
seg (db=Seg db_id=seg from=71 to=91)
DNA TRANSLOCASE FTSK (db=HMMPanther db_id=PTHR22683:SF1 from=17 to=169 evalue=2.1e-05)
ACD65_25_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(499..1035)
DNA (537bp) protein (179aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
ACD65_25_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

1126..1875
DNA (750bp) protein (250aa)
glutamyl/glutaminyl-tRNA synthetase
seg (db=Seg db_id=seg from=208 to=223)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=8 to=19 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
GLUTAMYL-TRNA SYNTHETASE 1, 2, 3 (GLUTAMATE--TRNA LIGASE 1, 2, 3) (db=HMMPanther db_id=PTHR10119:SF1 from=5 to=206 evalue=5.7e-122)
ACD65_25_4
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

1932..2639
DNA (708bp) protein (236aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCD6_9FIRM (db=UNIREF evalue=8.0e-43 bit_score=177.0 identity=39.06 coverage=90.2542372881356)
coiled-coil (db=Coil db_id=coil from=144 to=165 evalue=NA)
GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10119 from=3 to=235 evalue=4.1e-47 interpro_id=IPR000924 interpro_description=Glutamyl/glutaminyl-tRNA synthetase, class Ic GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Molecular Function: ligase activity, forming aminoacyl-tRNA and related compounds (GO:0016876), Biological Process: tRNA aminoacylation
ACD65_25_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

2680..3333
DNA (654bp) protein (218aa)
seg (db=Seg db_id=seg from=154 to=168)
Uncharacterized protein {ECO:0000313|EMBL:KKT02923.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_25_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

3393..3728
DNA (336bp) protein (112aa)
3393..3728 + (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT02922.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_25_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

3725..4030
DNA (306bp) protein (102aa)
coiled-coil (db=Coil db_id=coil from=40 to=68 evalue=NA)
seg (db=Seg db_id=seg from=5 to=14)
seg (db=Seg db_id=seg from=67 to=80)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
ACD65_25_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

4027..4773
DNA (747bp) protein (249aa)
seg (db=Seg db_id=seg from=182 to=195)
PHP domain-like (db=superfamily db_id=SSF89550 from=1 to=207 evalue=6.5e-23 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
PHP (db=HMMPfam db_id=PF02811 from=6 to=203 evalue=1.5e-07 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824))
Uncharacterized protein {ECO:0000313|EMBL:KKT02920.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_25_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

4804..5550
DNA (747bp) protein (249aa)
phosphate acetyltransferase (EC:2.3.1.8)
seg (db=Seg db_id=seg from=193 to=206)
seg (db=Seg db_id=seg from=232 to=245)
PTA_PTB (db=HMMPfam db_id=PF01515 from=4 to=191 evalue=4.9e-52 interpro_id=IPR002505 interpro_description=Phosphate acetyl/butaryl transferase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: acyltransferase activity (GO:0008415))
ACD65_25_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

5540..5806
DNA (267bp) protein (89aa)
Phosphate acetyltransferase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5L492_9ALVE (db=UNIREF evalue=6.0e-29 bit_score=129.0 identity=67.06 coverage=94.3820224719101)
phosphate acetyltransferase
PTA_PTB (db=HMMPfam db_id=PF01515 from=1 to=82 evalue=6.4e-38 interpro_id=IPR002505 interpro_description=Phosphate acetyl/butaryl transferase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: acyltransferase activity (GO:0008415))
Isocitrate/Isopropylmalate dehydrogenase-like (db=superfamily db_id=SSF53659 from=1 to=86 evalue=1.2e-28)
ACD65_25_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

5808..7019
DNA (1212bp) protein (404aa)
ackA; acetate kinase (EC:2.7.2.1)
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=ACKA_CARHZ (db=UNIREF evalue=8.0e-98 bit_score=360.0 identity=48.43 coverage=98.2673267326733)
seg (db=Seg db_id=seg from=92 to=103)
Displaying 11 items

View Taxonomy