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ACD65_29

Alias: ACD65_132979.15480.6

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_29_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(2..1402)
DNA (1401bp) protein (467aa)
seg (db=Seg db_id=seg from=391 to=407)
seg (db=Seg db_id=seg from=197 to=207)
seg (db=Seg db_id=seg from=170 to=184)
coiled-coil (db=Coil db_id=coil from=136 to=157 evalue=NA)
ACD65_29_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(1485..2555)
DNA (1071bp) protein (357aa)
hypothetical protein
Uncharacterized protein MJ1136 n=4 Tax=Methanocaldococcus RepID=Y1136_METJA (db=UNIREF evalue=3.0e-79 bit_score=298.0 identity=46.47 coverage=98.8795518207283)
coiled-coil (db=Coil db_id=coil from=15 to=41 evalue=NA)
HISTONE ACETYLTRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11135 from=2 to=356 evalue=9.8e-104)
ACD65_29_3
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

3106..3792
DNA (687bp) protein (229aa)
methyltransferase type 11
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=224 evalue=4.2e-34)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=17 to=213 evalue=3.8e-28)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR13069 from=3 to=149 evalue=1.6e-21)
ACD65_29_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

3795..4619
DNA (825bp) protein (275aa)
tagA; putative N-acetylmannosaminyltransferase TagA (EC:2.4.1.187)
seg (db=Seg db_id=seg from=209 to=219)
Glyco_tran_WecB (db=HMMPfam db_id=PF03808 from=53 to=252 evalue=8.1e-42 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
wecB_tagA_cpsF: glycosyl transferase, (db=HMMTigr db_id=TIGR00696 from=53 to=259 evalue=1.8e-21 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
ACD65_29_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4635..4922)
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=5 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:KKT02813.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_29_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4989..6413)
DNA (1425bp) protein (475aa)
Glutamyl-tRNA(Gln) amidotransferase, B subunit n=1 Tax=Thermincola sp. JR RepID=D5XD91_9FIRM (db=UNIREF evalue=6.0e-148 bit_score=527.0 identity=51.57 coverage=99.3684210526316)
glutamyl-tRNA(Gln) amidotransferase subunit B
glutamyl-tRNA(Gln) amidotransferase subunit B
GATB (db=PatternScan db_id=PS01234 from=141 to=155 evalue=0.0 interpro_id=IPR017958 interpro_description=Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO=Biological Process: translation (GO:0006412), Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
ACD65_29_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(6398..6982)
DNA (585bp) protein (195aa)
Dephospho-CoA kinase n=4 Tax=Lactobacillus jensenii RepID=C4VNY9_9LACO (db=UNIREF evalue=4.0e-08 bit_score=60.8 identity=38.96 coverage=38.974358974359)
seg (db=Seg db_id=seg from=2 to=15)
seg (db=Seg db_id=seg from=173 to=184)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=184 evalue=7.7e-21)
ACD65_29_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(6979..7464)
DNA (486bp) protein (162aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
Uncharacterized protein {ECO:0000313|EMBL:KKT02810.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
hypothetical protein
ACD65_29_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

7706..8422
DNA (717bp) protein (239aa)
signal peptidase I
Signal peptidase I n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ75_THERP (db=UNIREF evalue=1.0e-22 bit_score=109.0 identity=38.61 coverage=74.0585774058577)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg (db=Seg db_id=seg from=42 to=51)
ACD65_29_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8439..8675)
DNA (237bp) protein (79aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=69)
Uncharacterized protein {ECO:0000313|EMBL:KKT02808.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_29_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8855..9454)
DNA (600bp) protein (200aa)
phage SPO1 DNA polymerase-related protein
Phage DNA polymerase-related protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXL9_THERP (db=UNIREF evalue=3.0e-53 bit_score=211.0 identity=57.8 coverage=83.5)
seg (db=Seg db_id=seg from=179 to=197)
UDG_fam4: uracil-DNA glycosylase, family (db=HMMTigr db_id=TIGR00758 from=15 to=187 evalue=2.0e-78 interpro_id=IPR005273 interpro_description=Phage SPO1 DNA polymerase-related protein)
ACD65_29_12
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(9447..10421)
DNA (975bp) protein (325aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=298 to=320)
transmembrane_regions (db=TMHMM db_id=tmhmm from=236 to=258)
transmembrane_regions (db=TMHMM db_id=tmhmm from=212 to=229)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD65_29_13
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

10630..11544
DNA (915bp) protein (305aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=D4H5R1_DENA2 (db=UNIREF evalue=1.0e-50 bit_score=203.0 identity=36.67 coverage=97.0491803278689)
fmt: methionyl-tRNA formyltransferase (db=HMMTigr db_id=TIGR00460 from=2 to=303 evalue=4.3e-67 interpro_id=IPR005794 interpro_description=Methionyl-tRNA formyltransferase GO=Molecular Function: methionyl-tRNA formyltransferase activity (GO:0004479), Biological Process: translation (GO:0006412))
Formyltransferase (db=superfamily db_id=SSF53328 from=2 to=203 evalue=1.0e-54 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD65_29_14
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(11468..12709)
DNA (1242bp) protein (414aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=210 to=232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=247 to=264)
ACD65_29_15
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(12699..14135)
DNA (1437bp) protein (479aa)
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein (db=KEGG evalue=2.0e-14 bit_score=84.7 identity=23.67 coverage=72.2338204592902)
seg (db=Seg db_id=seg from=176 to=189)
seg (db=Seg db_id=seg from=454 to=465)
seg (db=Seg db_id=seg from=247 to=264)
ACD65_29_16
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(14180..15067)
DNA (888bp) protein (296aa)
glycosyl transferase family protein
Glycosyl transferase, family 2 n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G6B1_GEOUR (db=UNIREF evalue=2.0e-32 bit_score=142.0 identity=37.04 coverage=80.0675675675676)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=291 evalue=1.2e-47)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=218 evalue=9.2e-39)
ACD65_29_17
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(15181..15513)
DNA (333bp) protein (111aa)
Single-stranded DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZA46_BREBN (db=UNIREF evalue=3.0e-16 bit_score=87.0 identity=41.82 coverage=96.3963963963964)
ssb_2; helix-destabilizing protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=100 evalue=2.9e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=1 to=95 evalue=5.2e-25 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
Displaying 17 items

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