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ACD65_32

Alias: ACD65_3406.5423.10

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_32_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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2..208
DNA (207bp) protein (69aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4)
GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A (db=HMMPanther db_id=PTHR11895:SF7 from=1 to=68 evalue=2.8e-18)
AMIDASE (db=HMMPanther db_id=PTHR11895 from=1 to=68 evalue=2.8e-18 interpro_id=IPR000120 interpro_description=Amidase GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
Amidase signature (AS) enzymes (db=superfamily db_id=SSF75304 from=1 to=68 evalue=1.6e-14 interpro_id=IPR000120 interpro_description=Amidase GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
ACD65_32_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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345..1499
DNA (1155bp) protein (385aa)
345..1499 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD65_32_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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1589..1873
DNA (285bp) protein (95aa)
1589..1873 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD65_32_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(1877..2602)
DNA (726bp) protein (242aa)
Transcriptional regulator, TrmB
seg (db=Seg db_id=seg from=77 to=88)
TrmB (db=HMMPfam db_id=PF01978 from=6 to=74 evalue=1.4e-14 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=93 evalue=4.0e-08)
ACD65_32_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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2921..4303
DNA (1383bp) protein (461aa)
Glutamine synthetase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVR4_HERA2 (db=UNIREF evalue=1.0e-149 bit_score=533.0 identity=56.92 coverage=95.6616052060738)
glutamine synthetase
glutamine synthetase
GLNA_1 (db=PatternScan db_id=PS00180 from=62 to=80 evalue=0.0 interpro_id=IPR008147 interpro_description=Glutamine synthetase, beta-Grasp GO=Molecular Function: glutamate-ammonia ligase activity (GO:0004356), Biological Process: glutamine biosynthetic process (GO:0006542), Biological Process: nitrogen compound metabolic process (GO:0006807))
ACD65_32_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(4376..5353)
DNA (978bp) protein (326aa)
hypothetical protein
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=2 to=317 evalue=1.7e-38 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=7 to=173 evalue=2.3e-24 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
DNA polymerase III clamp loader subunits, C-terminal domain (db=superfamily db_id=SSF48019 from=196 to=316 evalue=3.6e-20 interpro_id=IPR008921 interpro_description=DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
Displaying 6 items

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