ggKbase home page

ACD65_46

Alias: ACD65_144727.2141.6

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_46_1

Not on your lists

2..187
DNA (186bp) protein (62aa)
R3H (db=HMMPfam db_id=PF01424 from=8 to=57 evalue=1.8e-08 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
Uncharacterized protein {ECO:0000313|EMBL:EKD48220.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_46_2
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

839..1021
DNA (183bp) protein (61aa)
seg (db=Seg db_id=seg from=42 to=53)
Cellulosome-anchoring protein {ECO:0000313|EMBL:KKT20396.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
ACD65_46_3

Not on your lists

1005..1217
DNA (213bp) protein (71aa)
lipoprotein A
Rare lipoprotein A n=1 Tax=Vibrio shilonii AK1 RepID=A6D2K0_9VIBR (db=UNIREF evalue=7.0e-18 bit_score=92.8 identity=61.54 coverage=90.1408450704225)
DPBB_1 (db=HMMPfam db_id=PF03330 from=1 to=63 evalue=2.7e-14 interpro_id=IPR005132 interpro_description=Rare lipoprotein A)
Barwin-like endoglucanases (db=superfamily db_id=SSF50685 from=1 to=66 evalue=4.2e-12 interpro_id=IPR009009 interpro_description=Barwin-related endoglucanase)
ACD65_46_4

Not on your lists

1217..1597
DNA (381bp) protein (127aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
seg (db=Seg db_id=seg from=75 to=86)
seg (db=Seg db_id=seg from=47 to=58)
seg (db=Seg db_id=seg from=8 to=19)
ACD65_46_5

Not on your lists

comp(1621..1902)
DNA (282bp) protein (94aa)
S23 ribosomal protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YW10_9FLAO (db=UNIREF evalue=1.0e-16 bit_score=88.6 identity=50.56 coverage=93.6170212765958)
S23 ribosomal protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=2 to=86 evalue=1.3e-26 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal protein {ECO:0000313|EMBL:EKD48218.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_46_6

Not on your lists

comp(2052..2174)
DNA (123bp) protein (41aa)
2052..2174 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD48219.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

View Taxonomy