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ACD65_63

Alias: ACD65_220323.6922.6

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_63_1
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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comp(1..474)
DNA (474bp) protein (158aa)
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein alias=ACD65_220323.6922.6_1,ACD65_220323.6922.6G0001,ACD65_C00063G00001 id=98156 tax=ACD65 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=PER organism_desc=PER
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KKT20483.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
ACD65_63_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(443..1690)
DNA (1248bp) protein (416aa)
secretion protein hlyd
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=287 to=305)
seg (db=Seg db_id=seg from=388 to=401)
ACD65_63_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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1752..2204
DNA (453bp) protein (151aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKT02967.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_63_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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2201..2539
DNA (339bp) protein (113aa)
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIY7_HIRBI (db=UNIREF evalue=4.0e-11 bit_score=70.1 identity=36.17 coverage=80.5309734513274)
seg (db=Seg db_id=seg from=97 to=111)
HesB-like domain (db=superfamily db_id=SSF89360 from=1 to=92 evalue=3.9e-20 interpro_id=IPR000361 interpro_description=FeS cluster biogenesis)
ACD65_63_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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2573..2740
DNA (168bp) protein (56aa)
2573..2740 + (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT02965.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_63_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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2765..3676
DNA (912bp) protein (304aa)
seg (db=Seg db_id=seg from=266 to=276)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
Uncharacterized protein {ECO:0000313|EMBL:KKT02964.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_63_7
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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4018..4377
DNA (360bp) protein (120aa)
50S ribosomal protein L7/L12 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A2 (db=UNIREF evalue=8.0e-32 bit_score=139.0 identity=61.9 coverage=85.8333333333333)
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKT20488.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
hypothetical protein
ACD65_63_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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4384..5142
DNA (759bp) protein (253aa)
seg (db=Seg db_id=seg from=79 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
Uncharacterized protein {ECO:0000313|EMBL:KKT02962.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_63_9
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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5225..6184
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase n=2 Tax=Roseburia intestinalis RepID=C7G5P7_9FIRM (db=UNIREF evalue=6.0e-63 bit_score=244.0 identity=41.16 coverage=95.0)
tRNA-U20-dihydrouridine synthase
UPF0034 (db=PatternScan db_id=PS01136 from=97 to=115 evalue=0.0 interpro_id=IPR018517 interpro_description=tRNA-dihydrouridine synthase, conserved site GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
nifR3_yhdG: putative TIM-barrel protein, n (db=HMMTigr db_id=TIGR00737 from=10 to=318 evalue=1.5e-95 interpro_id=IPR004652 interpro_description=tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
ACD65_63_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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6297..6857
DNA (561bp) protein (187aa)
twitching motility protein
seg (db=Seg db_id=seg from=163 to=176)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=163 evalue=5.0e-34)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=101 to=164 evalue=3.0e-14)
Displaying 10 items

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