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ACD65_79

Alias: ACD65_545242.4432.6

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_79_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
30S ribosomal protein S16
RIBOSOMAL_S16 (db=PatternScan db_id=PS00732 from=2 to=11 evalue=0.0 interpro_id=IPR020592 interpro_description=Ribosomal protein S16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S16: ribosomal protein S16 (db=HMMTigr db_id=TIGR00002 from=2 to=79 evalue=5.7e-30 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919 from=1 to=78 evalue=1.3e-29 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD65_79_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(323..628)
DNA (306bp) protein (102aa)
DUF721 (db=HMMPfam db_id=PF05258 from=8 to=98 evalue=2.3e-07 interpro_id=IPR007922 interpro_description=Protein of unknown function DUF721)
Uncharacterized protein {ECO:0000313|EMBL:KKT01946.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_79_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(656..790)
DNA (135bp) protein (45aa)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=40 evalue=2.8e-06)
group 1 glycosyl transferase Tax=PER_GWF2_43_17
ACD65_79_4

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863..988
DNA (126bp) protein (42aa)
863..988 + (rbs_motif=CCCCCC rbs_spacer=15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47699.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_79_5

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1492..1728
DNA (237bp) protein (79aa)
seg (db=Seg db_id=seg from=24 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKD47700.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_79_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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1895..2215
DNA (321bp) protein (107aa)
1895..2215 + (rbs_motif=TAA rbs_spacer=11bp)
Tax=PER_GWF2_43_17
ACD65_79_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(2169..3050)
DNA (882bp) protein (294aa)
epoxyqueuosine reductase
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=233 to=244 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=182 to=193 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
alpha-helical ferredoxin (db=superfamily db_id=SSF46548 from=126 to=248 evalue=1.6e-20 interpro_id=IPR009051 interpro_description=Alpha-helical ferredoxin GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: iron-sulfur cluster binding (GO:0051536), Biological Process: oxidation reduction (GO:0055114))
ACD65_79_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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3121..3435
DNA (315bp) protein (105aa)
seg (db=Seg db_id=seg from=93 to=103)
Ribosomal_S30AE (db=HMMPfam db_id=PF02482 from=8 to=103 evalue=4.6e-12 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=3 to=103 evalue=5.3e-12 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
no description (db=Gene3D db_id=G3DSA:3.30.160.100 from=4 to=100 evalue=4.5e-07 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
ACD65_79_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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3442..4464
DNA (1023bp) protein (341aa)
metal dependent phosphohydrolase
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=331 to=341)
seg (db=Seg db_id=seg from=39 to=53)
Displaying 9 items

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